Gene : Pp3c7_10820 P. patens v3.3
Defline:  (1 of 1) PF04632 - Fusaric acid resistance protein family (FUSC) Genomic Order:  588
Name:  ? Pp3c7_10820 Secondary Identifier:  ? PAC:32925397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_10820 0.5kb upstream 0.5kb upstream 5210 true Chr07: 7135160-7140369 Physcomitrium patens
Pp3c7_10820 0.5kb upstream 0.5kb upstream 500 false Chr07: 7139870-7140369 Physcomitrium patens
Pp3c7_10820 0.5kb downstream 0.5kb downstream 5210 true Chr07: 7134660-7139869 Physcomitrium patens
Pp3c7_10820 0.5kb downstream 0.5kb downstream 500 false Chr07: 7134660-7135159 Physcomitrium patens
Pp3c7_10820 1.0kb upstream 1.0kb upstream 5710 true Chr07: 7135160-7140869 Physcomitrium patens
Pp3c7_10820 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7139870-7140869 Physcomitrium patens
Pp3c7_10820 1.0kb downstream 1.0kb downstream 5710 true Chr07: 7134160-7139869 Physcomitrium patens
Pp3c7_10820 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7134160-7135159 Physcomitrium patens
Pp3c7_10820 2.0kb upstream 2.0kb upstream 6710 true Chr07: 7135160-7141869 Physcomitrium patens
Pp3c7_10820 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7139870-7141869 Physcomitrium patens
Pp3c7_10820 2.0kb downstream 2.0kb downstream 6710 true Chr07: 7133160-7139869 Physcomitrium patens
Pp3c7_10820 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7133160-7135159 Physcomitrium patens
Pp3c7_10820 5.0kb upstream 5.0kb upstream 9710 true Chr07: 7135160-7144869 Physcomitrium patens
Pp3c7_10820 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7139870-7144869 Physcomitrium patens
Pp3c7_10820 5.0kb downstream 5.0kb downstream 9710 true Chr07: 7130160-7139869 Physcomitrium patens
Pp3c7_10820 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7130160-7135159 Physcomitrium patens
Pp3c7_10820 10.0kb upstream 10.0kb upstream 14710 true Chr07: 7135160-7149869 Physcomitrium patens
Pp3c7_10820 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7139870-7149869 Physcomitrium patens
Pp3c7_10820 10.0kb downstream 10.0kb downstream 14710 true Chr07: 7125160-7139869 Physcomitrium patens
Pp3c7_10820 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7125160-7135159 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351604 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.812        
cufflinks 2.588        
cufflinks 2.915       High
cufflinks 2.722        
cufflinks 4.581       High
cufflinks 2.442        
cufflinks 2.111        
cufflinks 1.37        
cufflinks 2.603        
cufflinks 1.337        
cufflinks 2.157        
cufflinks 0.929       Low
cufflinks 1.065       Low
cufflinks 1.573        
cufflinks 1.535        
cufflinks 1.193        
cufflinks 2.209        
cufflinks 0.681       Low
cufflinks 0.859       Low
cufflinks 1.171        
cufflinks 1.822        
cufflinks 2.369        
cufflinks 2.224        
cufflinks 2.138        
cufflinks 1.674        
cufflinks 3.105       High
cufflinks 0.83       Low
cufflinks 1.445        
cufflinks 0.859       Low
cufflinks 3.095       High

0 Strain