Gene : Pp3c6_5650 P. patens v3.3
Defline:  (1 of 16) PTHR24006//PTHR24006:SF435 - FAMILY NOT NAMED // F-BOX/LRR-REPEAT PROTEIN 4 Genomic Order:  261
Name:  ? Pp3c6_5650 Secondary Identifier:  ? PAC:32976561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c6_5650 0.5kb upstream 0.5kb upstream 2797   true Chr06: 3290269-3293065 Physcomitrium patens
Pp3c6_5650 0.5kb upstream 0.5kb upstream 500   false Chr06: 3290269-3290768 Physcomitrium patens
Pp3c6_5650 0.5kb downstream 0.5kb downstream 2797   true Chr06: 3290769-3293565 Physcomitrium patens
Pp3c6_5650 0.5kb downstream 0.5kb downstream 500   false Chr06: 3293066-3293565 Physcomitrium patens
Pp3c6_5650 1.0kb upstream 1.0kb upstream 3297   true Chr06: 3289769-3293065 Physcomitrium patens
Pp3c6_5650 1.0kb upstream 1.0kb upstream 1000   false Chr06: 3289769-3290768 Physcomitrium patens
Pp3c6_5650 1.0kb downstream 1.0kb downstream 3297   true Chr06: 3290769-3294065 Physcomitrium patens
Pp3c6_5650 1.0kb downstream 1.0kb downstream 1000   false Chr06: 3293066-3294065 Physcomitrium patens
Pp3c6_5650 2.0kb upstream 2.0kb upstream 4297   true Chr06: 3288769-3293065 Physcomitrium patens
Pp3c6_5650 2.0kb upstream 2.0kb upstream 2000   false Chr06: 3288769-3290768 Physcomitrium patens
Pp3c6_5650 2.0kb downstream 2.0kb downstream 4297   true Chr06: 3290769-3295065 Physcomitrium patens
Pp3c6_5650 2.0kb downstream 2.0kb downstream 2000   false Chr06: 3293066-3295065 Physcomitrium patens
Pp3c6_5650 5.0kb upstream 5.0kb upstream 7297   true Chr06: 3285769-3293065 Physcomitrium patens
Pp3c6_5650 5.0kb upstream 5.0kb upstream 5000   false Chr06: 3285769-3290768 Physcomitrium patens
Pp3c6_5650 5.0kb downstream 5.0kb downstream 7297   true Chr06: 3290769-3298065 Physcomitrium patens
Pp3c6_5650 5.0kb downstream 5.0kb downstream 5000   false Chr06: 3293066-3298065 Physcomitrium patens
Pp3c6_5650 10.0kb upstream 10.0kb upstream 12297   true Chr06: 3280769-3293065 Physcomitrium patens
Pp3c6_5650 10.0kb upstream 10.0kb upstream 10000   false Chr06: 3280769-3290768 Physcomitrium patens
Pp3c6_5650 10.0kb downstream 10.0kb downstream 12297   true Chr06: 3290769-3303065 Physcomitrium patens
Pp3c6_5650 10.0kb downstream 10.0kb downstream 10000   false Chr06: 3293066-3303065 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121334935 5274 Embryophyte Singleton cluster - no MSA
123371801 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain