Gene : Pp3c7_26820 P. patens v3.3
Genomic Order:  1308 Name:  ? Pp3c7_26820
Secondary Identifier:  ? PAC:32923784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_26820 0.5kb upstream 0.5kb upstream 14683 true Chr07: 17829475-17844157 Physcomitrium patens
Pp3c7_26820 0.5kb upstream 0.5kb upstream 500 false Chr07: 17829475-17829974 Physcomitrium patens
Pp3c7_26820 0.5kb downstream 0.5kb downstream 14683 true Chr07: 17829975-17844657 Physcomitrium patens
Pp3c7_26820 0.5kb downstream 0.5kb downstream 500 false Chr07: 17844158-17844657 Physcomitrium patens
Pp3c7_26820 1.0kb upstream 1.0kb upstream 15183 true Chr07: 17828975-17844157 Physcomitrium patens
Pp3c7_26820 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17828975-17829974 Physcomitrium patens
Pp3c7_26820 1.0kb downstream 1.0kb downstream 15183 true Chr07: 17829975-17845157 Physcomitrium patens
Pp3c7_26820 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17844158-17845157 Physcomitrium patens
Pp3c7_26820 2.0kb upstream 2.0kb upstream 16183 true Chr07: 17827975-17844157 Physcomitrium patens
Pp3c7_26820 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17827975-17829974 Physcomitrium patens
Pp3c7_26820 2.0kb downstream 2.0kb downstream 16183 true Chr07: 17829975-17846157 Physcomitrium patens
Pp3c7_26820 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17844158-17846157 Physcomitrium patens
Pp3c7_26820 5.0kb upstream 5.0kb upstream 19183 true Chr07: 17824975-17844157 Physcomitrium patens
Pp3c7_26820 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17824975-17829974 Physcomitrium patens
Pp3c7_26820 5.0kb downstream 5.0kb downstream 19183 true Chr07: 17829975-17849157 Physcomitrium patens
Pp3c7_26820 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17844158-17849157 Physcomitrium patens
Pp3c7_26820 10.0kb upstream 10.0kb upstream 24183 true Chr07: 17819975-17844157 Physcomitrium patens
Pp3c7_26820 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17819975-17829974 Physcomitrium patens
Pp3c7_26820 10.0kb downstream 10.0kb downstream 24183 true Chr07: 17829975-17854157 Physcomitrium patens
Pp3c7_26820 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17844158-17854157 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347924 5274 Embryophyte View MSA
123380675 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.065        
cufflinks 0.908        
cufflinks 0.629       Low
cufflinks 1.247        
cufflinks 2.284       High
cufflinks 1.804        
cufflinks 1.175        
cufflinks 1.275        
cufflinks 0.812       Low
cufflinks 1.876       High
cufflinks 1.066        
cufflinks 2.29       High
cufflinks 1.133        
cufflinks 1.385        
cufflinks 1.457        
cufflinks 2.104       High
cufflinks 1.59        
cufflinks 1.285        
cufflinks 1.951       High
cufflinks 0.837       Low
cufflinks 1.637        
cufflinks 0.679       Low
cufflinks 1.231        
cufflinks 1.352        
cufflinks 1.776        
cufflinks 2.034       High
cufflinks 0.702       Low
cufflinks 1.092        
cufflinks 1.964       High
cufflinks 1.062        

0 Strain