Gene : Pp3c8_10920 P. patens v3.3
Defline:  (1 of 1) PTHR21625:SF1 - DYNEIN REGULATORY COMPLEX PROTEIN 1 Genomic Order:  442
Name:  ? Pp3c8_10920 Secondary Identifier:  ? PAC:32964429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_10920 0.5kb upstream 0.5kb upstream 4884 true Chr08: 7007221-7012104 Physcomitrium patens
Pp3c8_10920 0.5kb upstream 0.5kb upstream 500 false Chr08: 7011605-7012104 Physcomitrium patens
Pp3c8_10920 0.5kb downstream 0.5kb downstream 4884 true Chr08: 7006721-7011604 Physcomitrium patens
Pp3c8_10920 0.5kb downstream 0.5kb downstream 500 false Chr08: 7006721-7007220 Physcomitrium patens
Pp3c8_10920 1.0kb upstream 1.0kb upstream 5384 true Chr08: 7007221-7012604 Physcomitrium patens
Pp3c8_10920 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7011605-7012604 Physcomitrium patens
Pp3c8_10920 1.0kb downstream 1.0kb downstream 5384 true Chr08: 7006221-7011604 Physcomitrium patens
Pp3c8_10920 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7006221-7007220 Physcomitrium patens
Pp3c8_10920 2.0kb upstream 2.0kb upstream 6384 true Chr08: 7007221-7013604 Physcomitrium patens
Pp3c8_10920 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7011605-7013604 Physcomitrium patens
Pp3c8_10920 2.0kb downstream 2.0kb downstream 6384 true Chr08: 7005221-7011604 Physcomitrium patens
Pp3c8_10920 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7005221-7007220 Physcomitrium patens
Pp3c8_10920 5.0kb upstream 5.0kb upstream 9384 true Chr08: 7007221-7016604 Physcomitrium patens
Pp3c8_10920 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7011605-7016604 Physcomitrium patens
Pp3c8_10920 5.0kb downstream 5.0kb downstream 9384 true Chr08: 7002221-7011604 Physcomitrium patens
Pp3c8_10920 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7002221-7007220 Physcomitrium patens
Pp3c8_10920 10.0kb upstream 10.0kb upstream 14384 true Chr08: 7007221-7021604 Physcomitrium patens
Pp3c8_10920 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7011605-7021604 Physcomitrium patens
Pp3c8_10920 10.0kb downstream 10.0kb downstream 14384 true Chr08: 6997221-7011604 Physcomitrium patens
Pp3c8_10920 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6997221-7007220 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343026 5274 Embryophyte View MSA
123427198 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.325       High
cufflinks 0.673       Low
cufflinks 1.282        
cufflinks 2.871       High
cufflinks 2.251        
cufflinks 2.129        
cufflinks 1.325        
cufflinks 0.834        
cufflinks 1.1        
cufflinks 4.396       High
cufflinks 2.482        
cufflinks 2.204        
cufflinks 2.104        
cufflinks 0.765       Low
cufflinks 1.83        
cufflinks 3.394       High
cufflinks 1.61        
cufflinks 2.579        
cufflinks 0.624       Low
cufflinks 0.726       Low
cufflinks 1.077        
cufflinks 1.369        
cufflinks 2.129        
cufflinks 0.602       Low
cufflinks 0.6       Low
cufflinks 2.854       High
cufflinks 2.776       High
cufflinks 1.263        
cufflinks 0.869        
cufflinks 0.921        

0 Strain