Gene : Pp3c8_10480 P. patens v3.3
Defline:  (1 of 1) PTHR15217 - WILMS' TUMOR 1-ASSOCIATING PROTEIN Genomic Order:  436
Name:  ? Pp3c8_10480 Secondary Identifier:  ? PAC:32963790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_10480 0.5kb upstream 0.5kb upstream 5990 true Chr08: 6643540-6649529 Physcomitrium patens
Pp3c8_10480 0.5kb upstream 0.5kb upstream 500 false Chr08: 6649030-6649529 Physcomitrium patens
Pp3c8_10480 0.5kb downstream 0.5kb downstream 5990 true Chr08: 6643040-6649029 Physcomitrium patens
Pp3c8_10480 0.5kb downstream 0.5kb downstream 500 false Chr08: 6643040-6643539 Physcomitrium patens
Pp3c8_10480 1.0kb upstream 1.0kb upstream 6490 true Chr08: 6643540-6650029 Physcomitrium patens
Pp3c8_10480 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6649030-6650029 Physcomitrium patens
Pp3c8_10480 1.0kb downstream 1.0kb downstream 6490 true Chr08: 6642540-6649029 Physcomitrium patens
Pp3c8_10480 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6642540-6643539 Physcomitrium patens
Pp3c8_10480 2.0kb upstream 2.0kb upstream 7490 true Chr08: 6643540-6651029 Physcomitrium patens
Pp3c8_10480 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6649030-6651029 Physcomitrium patens
Pp3c8_10480 2.0kb downstream 2.0kb downstream 7490 true Chr08: 6641540-6649029 Physcomitrium patens
Pp3c8_10480 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6641540-6643539 Physcomitrium patens
Pp3c8_10480 5.0kb upstream 5.0kb upstream 10490 true Chr08: 6643540-6654029 Physcomitrium patens
Pp3c8_10480 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6649030-6654029 Physcomitrium patens
Pp3c8_10480 5.0kb downstream 5.0kb downstream 10490 true Chr08: 6638540-6649029 Physcomitrium patens
Pp3c8_10480 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6638540-6643539 Physcomitrium patens
Pp3c8_10480 10.0kb upstream 10.0kb upstream 15490 true Chr08: 6643540-6659029 Physcomitrium patens
Pp3c8_10480 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6649030-6659029 Physcomitrium patens
Pp3c8_10480 10.0kb downstream 10.0kb downstream 15490 true Chr08: 6633540-6649029 Physcomitrium patens
Pp3c8_10480 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6633540-6643539 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.412        
cufflinks 0.7        
cufflinks 0.568        
cufflinks 0.931        
cufflinks 0.577        
cufflinks 1.027        
cufflinks 0.807        
cufflinks 0.543        
cufflinks 0.811        
cufflinks 0.615        
cufflinks 1.087       High
cufflinks 0.985        
cufflinks 1.205       High
cufflinks 0.46        
cufflinks 0.736        
cufflinks 0.37       Low
cufflinks 0.948        
cufflinks 0.413        
cufflinks 0.791        
cufflinks 2.01       High
cufflinks 0.438        
cufflinks 0.303       Low
cufflinks 0.569        
cufflinks 1.56       High
cufflinks 0.705        
cufflinks 0.358       Low
cufflinks 1.027        
cufflinks 1.103       High
cufflinks 0.346       Low
cufflinks 0.456        

0 Strain