Gene : Pp3c7_5650 P. patens v3.3
Defline:  (1 of 7) PF05186 - Dpy-30 motif (Dpy-30) Genomic Order:  325
Name:  ? Pp3c7_5650 Secondary Identifier:  ? PAC:32924095
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0 Pathways

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_5650 0.5kb upstream 0.5kb upstream 3073 true Chr07: 3570607-3573679 Physcomitrium patens
Pp3c7_5650 0.5kb upstream 0.5kb upstream 500 false Chr07: 3573180-3573679 Physcomitrium patens
Pp3c7_5650 0.5kb downstream 0.5kb downstream 3073 true Chr07: 3570107-3573179 Physcomitrium patens
Pp3c7_5650 0.5kb downstream 0.5kb downstream 500 false Chr07: 3570107-3570606 Physcomitrium patens
Pp3c7_5650 1.0kb upstream 1.0kb upstream 3573 true Chr07: 3570607-3574179 Physcomitrium patens
Pp3c7_5650 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3573180-3574179 Physcomitrium patens
Pp3c7_5650 1.0kb downstream 1.0kb downstream 3573 true Chr07: 3569607-3573179 Physcomitrium patens
Pp3c7_5650 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3569607-3570606 Physcomitrium patens
Pp3c7_5650 2.0kb upstream 2.0kb upstream 4573 true Chr07: 3570607-3575179 Physcomitrium patens
Pp3c7_5650 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3573180-3575179 Physcomitrium patens
Pp3c7_5650 2.0kb downstream 2.0kb downstream 4573 true Chr07: 3568607-3573179 Physcomitrium patens
Pp3c7_5650 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3568607-3570606 Physcomitrium patens
Pp3c7_5650 5.0kb upstream 5.0kb upstream 7573 true Chr07: 3570607-3578179 Physcomitrium patens
Pp3c7_5650 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3573180-3578179 Physcomitrium patens
Pp3c7_5650 5.0kb downstream 5.0kb downstream 7573 true Chr07: 3565607-3573179 Physcomitrium patens
Pp3c7_5650 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3565607-3570606 Physcomitrium patens
Pp3c7_5650 10.0kb upstream 10.0kb upstream 12573 true Chr07: 3570607-3583179 Physcomitrium patens
Pp3c7_5650 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3573180-3583179 Physcomitrium patens
Pp3c7_5650 10.0kb downstream 10.0kb downstream 12573 true Chr07: 3560607-3573179 Physcomitrium patens
Pp3c7_5650 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3560607-3570606 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121328153 5274 Embryophyte Singleton cluster - no MSA
123427220 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072        
cufflinks 0.117        
cufflinks 0.119        
cufflinks 0.256       High
cufflinks 0.052     Low  
cufflinks 0.138        
cufflinks 0.129        
cufflinks 0.059     Low  
cufflinks 0.145        
cufflinks 0.253       High
cufflinks 0.022     Low Low
cufflinks 0.277       High
cufflinks 0.053     Low  
cufflinks 0.095        
cufflinks 0.142        
cufflinks 0.137        
cufflinks 0.046     Low Low
cufflinks 0.068     Low  
cufflinks 0.105        
cufflinks 0.156        
cufflinks 0.082     Low  
cufflinks 0.017     Low Low
cufflinks 0.278       High
cufflinks 0.233        
cufflinks 0.051     Low  
cufflinks 0.225        
cufflinks 0.159        
cufflinks 0.092        
cufflinks 0.119        
cufflinks 0.993       High

0 Strain