Gene : Pp3c7_6570 P. patens v3.3
Genomic Order:  373 Name:  ? Pp3c7_6570
Secondary Identifier:  ? PAC:32924105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

12 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c7_6570 0.5kb upstream 0.5kb upstream 1579 true Chr07: 4071713-4073291 Physcomitrium patens
Pp3c7_6570 0.5kb upstream 0.5kb upstream 500 false Chr07: 4071713-4072212 Physcomitrium patens
Pp3c7_6570 0.5kb downstream 0.5kb downstream 1579 true Chr07: 4072213-4073791 Physcomitrium patens
Pp3c7_6570 0.5kb downstream 0.5kb downstream 500 false Chr07: 4073292-4073791 Physcomitrium patens
Pp3c7_6570 1.0kb upstream 1.0kb upstream 2079 true Chr07: 4071213-4073291 Physcomitrium patens
Pp3c7_6570 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4071213-4072212 Physcomitrium patens
Pp3c7_6570 1.0kb downstream 1.0kb downstream 2079 true Chr07: 4072213-4074291 Physcomitrium patens
Pp3c7_6570 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4073292-4074291 Physcomitrium patens
Pp3c7_6570 2.0kb upstream 2.0kb upstream 3079 true Chr07: 4070213-4073291 Physcomitrium patens
Pp3c7_6570 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4070213-4072212 Physcomitrium patens
Pp3c7_6570 2.0kb downstream 2.0kb downstream 3079 true Chr07: 4072213-4075291 Physcomitrium patens
Pp3c7_6570 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4073292-4075291 Physcomitrium patens
Pp3c7_6570 5.0kb upstream 5.0kb upstream 6079 true Chr07: 4067213-4073291 Physcomitrium patens
Pp3c7_6570 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4067213-4072212 Physcomitrium patens
Pp3c7_6570 5.0kb downstream 5.0kb downstream 6079 true Chr07: 4072213-4078291 Physcomitrium patens
Pp3c7_6570 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4073292-4078291 Physcomitrium patens
Pp3c7_6570 10.0kb upstream 10.0kb upstream 11079 true Chr07: 4062213-4073291 Physcomitrium patens
Pp3c7_6570 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4062213-4072212 Physcomitrium patens
Pp3c7_6570 10.0kb downstream 10.0kb downstream 11079 true Chr07: 4072213-4083291 Physcomitrium patens
Pp3c7_6570 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4073292-4083291 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121328157 5274 Embryophyte Singleton cluster - no MSA
123365169 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.52        
cufflinks 21.03     High  
cufflinks 46.074     High High
cufflinks 43.573     High High
cufflinks 34.384     High  
cufflinks 17.926     High  
cufflinks 19.608        
cufflinks 21.545     High  
cufflinks 16.178        
cufflinks 39.754     High High
cufflinks 15.215       Low
cufflinks 26.069     High  
cufflinks 18.81     High  
cufflinks 15.868        
cufflinks 19.479        
cufflinks 25.177     High  
cufflinks 38.013     High High
cufflinks 19.047        
cufflinks 10.694       Low
cufflinks 15.371        
cufflinks 44.426     High High
cufflinks 19.117        
cufflinks 18.133        
cufflinks 12.375     High Low
cufflinks 24.803     High  
cufflinks 12.421       Low
cufflinks 30.981     High  
cufflinks 37.476     High High
cufflinks 27.148     High  
cufflinks 35.166     High High

0 Strain