Gene : Pp3c8_11730 P. patens v3.3
Genomic Order:  475 Name:  ? Pp3c8_11730
Secondary Identifier:  ? PAC:32966131
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_11730 0.5kb upstream 0.5kb upstream 3280 true Chr08: 7539843-7543122 Physcomitrium patens
Pp3c8_11730 0.5kb upstream 0.5kb upstream 500 false Chr08: 7539843-7540342 Physcomitrium patens
Pp3c8_11730 0.5kb downstream 0.5kb downstream 3280 true Chr08: 7540343-7543622 Physcomitrium patens
Pp3c8_11730 0.5kb downstream 0.5kb downstream 500 false Chr08: 7543123-7543622 Physcomitrium patens
Pp3c8_11730 1.0kb upstream 1.0kb upstream 3780 true Chr08: 7539343-7543122 Physcomitrium patens
Pp3c8_11730 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7539343-7540342 Physcomitrium patens
Pp3c8_11730 1.0kb downstream 1.0kb downstream 3780 true Chr08: 7540343-7544122 Physcomitrium patens
Pp3c8_11730 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7543123-7544122 Physcomitrium patens
Pp3c8_11730 2.0kb upstream 2.0kb upstream 4780 true Chr08: 7538343-7543122 Physcomitrium patens
Pp3c8_11730 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7538343-7540342 Physcomitrium patens
Pp3c8_11730 2.0kb downstream 2.0kb downstream 4780 true Chr08: 7540343-7545122 Physcomitrium patens
Pp3c8_11730 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7543123-7545122 Physcomitrium patens
Pp3c8_11730 5.0kb upstream 5.0kb upstream 7780 true Chr08: 7535343-7543122 Physcomitrium patens
Pp3c8_11730 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7535343-7540342 Physcomitrium patens
Pp3c8_11730 5.0kb downstream 5.0kb downstream 7780 true Chr08: 7540343-7548122 Physcomitrium patens
Pp3c8_11730 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7543123-7548122 Physcomitrium patens
Pp3c8_11730 10.0kb upstream 10.0kb upstream 12780 true Chr08: 7530343-7543122 Physcomitrium patens
Pp3c8_11730 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7530343-7540342 Physcomitrium patens
Pp3c8_11730 10.0kb downstream 10.0kb downstream 12780 true Chr08: 7540343-7553122 Physcomitrium patens
Pp3c8_11730 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7543123-7553122 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121333609 5274 Embryophyte Singleton cluster - no MSA
123427352 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.148        
cufflinks 3.644        
cufflinks 3.566        
cufflinks 3.337        
cufflinks 4.575        
cufflinks 1.883       Low
cufflinks 2.912        
cufflinks 4.679        
cufflinks 6.718       High
cufflinks 2.723        
cufflinks 4.238        
cufflinks 7.394       High
cufflinks 5.893        
cufflinks 2.398       Low
cufflinks 6.569        
cufflinks 1.933       Low
cufflinks 2.834        
cufflinks 11.082       High
cufflinks 4.591        
cufflinks 5.303        
cufflinks 3.501        
cufflinks 5.649        
cufflinks 10.661       High
cufflinks 4.862        
cufflinks 5.808        
cufflinks 4.13        
cufflinks 3.887        
cufflinks 5.361        
cufflinks 3.885        
cufflinks 5.542        

0 Strain