Gene : Pp3c8_12750 P. patens v3.3
Genomic Order:  530 Name:  ? Pp3c8_12750
Secondary Identifier:  ? PAC:32965871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_12750 0.5kb upstream 0.5kb upstream 2710 true Chr08: 8237101-8239810 Physcomitrium patens
Pp3c8_12750 0.5kb upstream 0.5kb upstream 500 false Chr08: 8239311-8239810 Physcomitrium patens
Pp3c8_12750 0.5kb downstream 0.5kb downstream 2710 true Chr08: 8236601-8239310 Physcomitrium patens
Pp3c8_12750 0.5kb downstream 0.5kb downstream 500 false Chr08: 8236601-8237100 Physcomitrium patens
Pp3c8_12750 1.0kb upstream 1.0kb upstream 3210 true Chr08: 8237101-8240310 Physcomitrium patens
Pp3c8_12750 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8239311-8240310 Physcomitrium patens
Pp3c8_12750 1.0kb downstream 1.0kb downstream 3210 true Chr08: 8236101-8239310 Physcomitrium patens
Pp3c8_12750 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8236101-8237100 Physcomitrium patens
Pp3c8_12750 2.0kb upstream 2.0kb upstream 4210 true Chr08: 8237101-8241310 Physcomitrium patens
Pp3c8_12750 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8239311-8241310 Physcomitrium patens
Pp3c8_12750 2.0kb downstream 2.0kb downstream 4210 true Chr08: 8235101-8239310 Physcomitrium patens
Pp3c8_12750 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8235101-8237100 Physcomitrium patens
Pp3c8_12750 5.0kb upstream 5.0kb upstream 7210 true Chr08: 8237101-8244310 Physcomitrium patens
Pp3c8_12750 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8239311-8244310 Physcomitrium patens
Pp3c8_12750 5.0kb downstream 5.0kb downstream 7210 true Chr08: 8232101-8239310 Physcomitrium patens
Pp3c8_12750 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8232101-8237100 Physcomitrium patens
Pp3c8_12750 10.0kb upstream 10.0kb upstream 12210 true Chr08: 8237101-8249310 Physcomitrium patens
Pp3c8_12750 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8239311-8249310 Physcomitrium patens
Pp3c8_12750 10.0kb downstream 10.0kb downstream 12210 true Chr08: 8227101-8239310 Physcomitrium patens
Pp3c8_12750 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8227101-8237100 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121333591 5274 Embryophyte Singleton cluster - no MSA
123370482 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain