Gene : Pp3c8_12460 P. patens v3.3
Defline:  (1 of 2) PTHR11941//PTHR11941:SF72 - ENOYL-COA HYDRATASE-RELATED Genomic Order:  518
Name:  ? Pp3c8_12460 Secondary Identifier:  ? PAC:32964460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_12460 0.5kb upstream 0.5kb upstream 3380 true Chr08: 8094288-8097667 Physcomitrium patens
Pp3c8_12460 0.5kb upstream 0.5kb upstream 500 false Chr08: 8094288-8094787 Physcomitrium patens
Pp3c8_12460 0.5kb downstream 0.5kb downstream 3380 true Chr08: 8094788-8098167 Physcomitrium patens
Pp3c8_12460 0.5kb downstream 0.5kb downstream 500 false Chr08: 8097668-8098167 Physcomitrium patens
Pp3c8_12460 1.0kb upstream 1.0kb upstream 3880 true Chr08: 8093788-8097667 Physcomitrium patens
Pp3c8_12460 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8093788-8094787 Physcomitrium patens
Pp3c8_12460 1.0kb downstream 1.0kb downstream 3880 true Chr08: 8094788-8098667 Physcomitrium patens
Pp3c8_12460 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8097668-8098667 Physcomitrium patens
Pp3c8_12460 2.0kb upstream 2.0kb upstream 4880 true Chr08: 8092788-8097667 Physcomitrium patens
Pp3c8_12460 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8092788-8094787 Physcomitrium patens
Pp3c8_12460 2.0kb downstream 2.0kb downstream 4880 true Chr08: 8094788-8099667 Physcomitrium patens
Pp3c8_12460 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8097668-8099667 Physcomitrium patens
Pp3c8_12460 5.0kb upstream 5.0kb upstream 7880 true Chr08: 8089788-8097667 Physcomitrium patens
Pp3c8_12460 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8089788-8094787 Physcomitrium patens
Pp3c8_12460 5.0kb downstream 5.0kb downstream 7880 true Chr08: 8094788-8102667 Physcomitrium patens
Pp3c8_12460 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8097668-8102667 Physcomitrium patens
Pp3c8_12460 10.0kb upstream 10.0kb upstream 12880 true Chr08: 8084788-8097667 Physcomitrium patens
Pp3c8_12460 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8084788-8094787 Physcomitrium patens
Pp3c8_12460 10.0kb downstream 10.0kb downstream 12880 true Chr08: 8094788-8107667 Physcomitrium patens
Pp3c8_12460 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8097668-8107667 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344921 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.519        
cufflinks 3.835        
cufflinks 4.84        
cufflinks 5.662        
cufflinks 3.628        
cufflinks 4.486        
cufflinks 2.229       Low
cufflinks 4.305        
cufflinks 3.785        
cufflinks 0.65       Low
cufflinks 3.131        
cufflinks 4.446        
cufflinks 5.308        
cufflinks 5.177        
cufflinks 3.74        
cufflinks 3.659        
cufflinks 5.081        
cufflinks 4.956        
cufflinks 5.725        
cufflinks 4.968        
cufflinks 4.436        
cufflinks 0.928       Low
cufflinks 5.646        
cufflinks 5.099        
cufflinks 4.662        
cufflinks 4.945        
cufflinks 4.495        
cufflinks 5.543        
cufflinks 5.4        
cufflinks 4.611        

0 Strain