Gene : Pp3c9_1090 P. patens v3.3
Defline:  (1 of 1) PTHR15691 - PROTEIN KIAA0196 Genomic Order:  47
Name:  ? Pp3c9_1090 Secondary Identifier:  ? PAC:32914221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_1090 0.5kb upstream 0.5kb upstream 4942 true Chr09: 617899-622840 Physcomitrium patens
Pp3c9_1090 0.5kb upstream 0.5kb upstream 500 false Chr09: 617899-618398 Physcomitrium patens
Pp3c9_1090 0.5kb downstream 0.5kb downstream 4942 true Chr09: 618399-623340 Physcomitrium patens
Pp3c9_1090 0.5kb downstream 0.5kb downstream 500 false Chr09: 622841-623340 Physcomitrium patens
Pp3c9_1090 1.0kb upstream 1.0kb upstream 5442 true Chr09: 617399-622840 Physcomitrium patens
Pp3c9_1090 1.0kb upstream 1.0kb upstream 1000 false Chr09: 617399-618398 Physcomitrium patens
Pp3c9_1090 1.0kb downstream 1.0kb downstream 5442 true Chr09: 618399-623840 Physcomitrium patens
Pp3c9_1090 1.0kb downstream 1.0kb downstream 1000 false Chr09: 622841-623840 Physcomitrium patens
Pp3c9_1090 2.0kb upstream 2.0kb upstream 6442 true Chr09: 616399-622840 Physcomitrium patens
Pp3c9_1090 2.0kb upstream 2.0kb upstream 2000 false Chr09: 616399-618398 Physcomitrium patens
Pp3c9_1090 2.0kb downstream 2.0kb downstream 6442 true Chr09: 618399-624840 Physcomitrium patens
Pp3c9_1090 2.0kb downstream 2.0kb downstream 2000 false Chr09: 622841-624840 Physcomitrium patens
Pp3c9_1090 5.0kb upstream 5.0kb upstream 9442 true Chr09: 613399-622840 Physcomitrium patens
Pp3c9_1090 5.0kb upstream 5.0kb upstream 5000 false Chr09: 613399-618398 Physcomitrium patens
Pp3c9_1090 5.0kb downstream 5.0kb downstream 9442 true Chr09: 618399-627840 Physcomitrium patens
Pp3c9_1090 5.0kb downstream 5.0kb downstream 5000 false Chr09: 622841-627840 Physcomitrium patens
Pp3c9_1090 10.0kb upstream 10.0kb upstream 14442 true Chr09: 608399-622840 Physcomitrium patens
Pp3c9_1090 10.0kb upstream 10.0kb upstream 10000 false Chr09: 608399-618398 Physcomitrium patens
Pp3c9_1090 10.0kb downstream 10.0kb downstream 14442 true Chr09: 618399-632840 Physcomitrium patens
Pp3c9_1090 10.0kb downstream 10.0kb downstream 10000 false Chr09: 622841-632840 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350075 5274 Embryophyte View MSA
123426807 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.328        
cufflinks 1.45        
cufflinks 1.185       Low
cufflinks 1.371        
cufflinks 1.262        
cufflinks 1.735        
cufflinks 1.307        
cufflinks 1.741        
cufflinks 2.352       High
cufflinks 1.408        
cufflinks 2.037       High
cufflinks 1.906        
cufflinks 1.443        
cufflinks 1.677        
cufflinks 1.175       Low
cufflinks 1.538        
cufflinks 1.274        
cufflinks 2.008       High
cufflinks 2.181       High
cufflinks 1.554        
cufflinks 1.072       Low
cufflinks 1.606        
cufflinks 1.428        
cufflinks 1.282        
cufflinks 1.208        
cufflinks 1.66        
cufflinks 0.782       Low
cufflinks 1.605        
cufflinks 2.24       High
cufflinks 1.381        

0 Strain