Gene : Pp3c9_13440 P. patens v3.3
Defline:  (1 of 1) 2.3.1.164 - Isopenicillin-N N-acyltransferase / Isopenicillin N:acyl-CoA acyltransferase Genomic Order:  623
Name:  ? Pp3c9_13440 Secondary Identifier:  ? PAC:32912735
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_13440 0.5kb upstream 0.5kb upstream 3565 true Chr09: 8983178-8986742 Physcomitrium patens
Pp3c9_13440 0.5kb upstream 0.5kb upstream 500 false Chr09: 8983178-8983677 Physcomitrium patens
Pp3c9_13440 0.5kb downstream 0.5kb downstream 3565 true Chr09: 8983678-8987242 Physcomitrium patens
Pp3c9_13440 0.5kb downstream 0.5kb downstream 500 false Chr09: 8986743-8987242 Physcomitrium patens
Pp3c9_13440 1.0kb upstream 1.0kb upstream 4065 true Chr09: 8982678-8986742 Physcomitrium patens
Pp3c9_13440 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8982678-8983677 Physcomitrium patens
Pp3c9_13440 1.0kb downstream 1.0kb downstream 4065 true Chr09: 8983678-8987742 Physcomitrium patens
Pp3c9_13440 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8986743-8987742 Physcomitrium patens
Pp3c9_13440 2.0kb upstream 2.0kb upstream 5065 true Chr09: 8981678-8986742 Physcomitrium patens
Pp3c9_13440 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8981678-8983677 Physcomitrium patens
Pp3c9_13440 2.0kb downstream 2.0kb downstream 5065 true Chr09: 8983678-8988742 Physcomitrium patens
Pp3c9_13440 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8986743-8988742 Physcomitrium patens
Pp3c9_13440 5.0kb upstream 5.0kb upstream 8065 true Chr09: 8978678-8986742 Physcomitrium patens
Pp3c9_13440 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8978678-8983677 Physcomitrium patens
Pp3c9_13440 5.0kb downstream 5.0kb downstream 8065 true Chr09: 8983678-8991742 Physcomitrium patens
Pp3c9_13440 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8986743-8991742 Physcomitrium patens
Pp3c9_13440 10.0kb upstream 10.0kb upstream 13065 true Chr09: 8973678-8986742 Physcomitrium patens
Pp3c9_13440 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8973678-8983677 Physcomitrium patens
Pp3c9_13440 10.0kb downstream 10.0kb downstream 13065 true Chr09: 8983678-8996742 Physcomitrium patens
Pp3c9_13440 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8986743-8996742 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348469 5274 Embryophyte View MSA
123380874 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.577        
cufflinks 1.52        
cufflinks 1.648        
cufflinks 1.685        
cufflinks 0.411       Low
cufflinks 1.155        
cufflinks 2.962       High
cufflinks 1.928        
cufflinks 0.095       Low
cufflinks 1.627        
cufflinks 0.285       Low
cufflinks 0.951        
cufflinks 0.35       Low
cufflinks 2.443        
cufflinks 1.06        
cufflinks 1.74        
cufflinks 2.418        
cufflinks 1.394        
cufflinks 1.722        
cufflinks 1.132        
cufflinks 0.069       Low
cufflinks 1.965        
cufflinks 1.685        
cufflinks 0.908        
cufflinks 1.035        
cufflinks 1.266        
cufflinks 1.709        
cufflinks 0.839        
cufflinks 0.907        
cufflinks 2.024        

0 Strain