Gene : Pp3c9_20 P. patens v3.3
Defline:  (1 of 2) PTHR31409:SF0 - WASH COMPLEX SUBUNIT 7 Genomic Order:  1
Name:  ? Pp3c9_20 Secondary Identifier:  ? PAC:32914309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_20 0.5kb upstream 0.5kb upstream 11552 true Chr09: 8880-20431 Physcomitrium patens
Pp3c9_20 0.5kb upstream 0.5kb upstream 500 false Chr09: 8880-9379 Physcomitrium patens
Pp3c9_20 0.5kb downstream 0.5kb downstream 11552 true Chr09: 9380-20931 Physcomitrium patens
Pp3c9_20 0.5kb downstream 0.5kb downstream 500 false Chr09: 20432-20931 Physcomitrium patens
Pp3c9_20 1.0kb upstream 1.0kb upstream 12052 true Chr09: 8380-20431 Physcomitrium patens
Pp3c9_20 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8380-9379 Physcomitrium patens
Pp3c9_20 1.0kb downstream 1.0kb downstream 12052 true Chr09: 9380-21431 Physcomitrium patens
Pp3c9_20 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20432-21431 Physcomitrium patens
Pp3c9_20 2.0kb upstream 2.0kb upstream 13052 true Chr09: 7380-20431 Physcomitrium patens
Pp3c9_20 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7380-9379 Physcomitrium patens
Pp3c9_20 2.0kb downstream 2.0kb downstream 13052 true Chr09: 9380-22431 Physcomitrium patens
Pp3c9_20 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20432-22431 Physcomitrium patens
Pp3c9_20 5.0kb upstream 5.0kb upstream 16052 true Chr09: 4380-20431 Physcomitrium patens
Pp3c9_20 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4380-9379 Physcomitrium patens
Pp3c9_20 5.0kb downstream 5.0kb downstream 16052 true Chr09: 9380-25431 Physcomitrium patens
Pp3c9_20 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20432-25431 Physcomitrium patens
Pp3c9_20 10.0kb upstream 10.0kb upstream 20431 true Chr09: 1-20431 Physcomitrium patens
Pp3c9_20 10.0kb upstream 10.0kb upstream 9379 false Chr09: 1-9379 Physcomitrium patens
Pp3c9_20 10.0kb downstream 10.0kb downstream 21052 true Chr09: 9380-30431 Physcomitrium patens
Pp3c9_20 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20432-30431 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350071 5274 Embryophyte View MSA
123426810 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.011     Low High
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.007     Low  
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low High
cufflinks 0.006     Low  
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  

0 Strain