Gene : Pp3c9_14540 P. patens v3.3
Defline:  (1 of 11) 1.10.3.1 - Catechol oxidase / Tyrosinase Genomic Order:  665
Name:  ? Pp3c9_14540 Secondary Identifier:  ? PAC:32913644
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6752 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_14540 0.5kb upstream 0.5kb upstream 3418 true Chr09: 9729664-9733081 Physcomitrium patens
Pp3c9_14540 0.5kb upstream 0.5kb upstream 500 false Chr09: 9732582-9733081 Physcomitrium patens
Pp3c9_14540 0.5kb downstream 0.5kb downstream 3418 true Chr09: 9729164-9732581 Physcomitrium patens
Pp3c9_14540 0.5kb downstream 0.5kb downstream 500 false Chr09: 9729164-9729663 Physcomitrium patens
Pp3c9_14540 1.0kb upstream 1.0kb upstream 3918 true Chr09: 9729664-9733581 Physcomitrium patens
Pp3c9_14540 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9732582-9733581 Physcomitrium patens
Pp3c9_14540 1.0kb downstream 1.0kb downstream 3918 true Chr09: 9728664-9732581 Physcomitrium patens
Pp3c9_14540 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9728664-9729663 Physcomitrium patens
Pp3c9_14540 2.0kb upstream 2.0kb upstream 4918 true Chr09: 9729664-9734581 Physcomitrium patens
Pp3c9_14540 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9732582-9734581 Physcomitrium patens
Pp3c9_14540 2.0kb downstream 2.0kb downstream 4918 true Chr09: 9727664-9732581 Physcomitrium patens
Pp3c9_14540 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9727664-9729663 Physcomitrium patens
Pp3c9_14540 5.0kb upstream 5.0kb upstream 7918 true Chr09: 9729664-9737581 Physcomitrium patens
Pp3c9_14540 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9732582-9737581 Physcomitrium patens
Pp3c9_14540 5.0kb downstream 5.0kb downstream 7918 true Chr09: 9724664-9732581 Physcomitrium patens
Pp3c9_14540 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9724664-9729663 Physcomitrium patens
Pp3c9_14540 10.0kb upstream 10.0kb upstream 12918 true Chr09: 9729664-9742581 Physcomitrium patens
Pp3c9_14540 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9732582-9742581 Physcomitrium patens
Pp3c9_14540 10.0kb downstream 10.0kb downstream 12918 true Chr09: 9719664-9732581 Physcomitrium patens
Pp3c9_14540 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9719664-9729663 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351024 5274 Embryophyte View MSA
123381978 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.022     Low  
cufflinks 0.005     Low Low
cufflinks 0.017     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.008     Low  
cufflinks 0.014     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain