Gene : Pp3c9_24620 P. patens v3.3
Genomic Order:  1118 Name:  ? Pp3c9_24620
Secondary Identifier:  ? PAC:32912261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_24620 0.5kb upstream 0.5kb upstream 728 true Chr09: 16760216-16760943 Physcomitrium patens
Pp3c9_24620 0.5kb upstream 0.5kb upstream 500 false Chr09: 16760444-16760943 Physcomitrium patens
Pp3c9_24620 0.5kb downstream 0.5kb downstream 728 true Chr09: 16759716-16760443 Physcomitrium patens
Pp3c9_24620 0.5kb downstream 0.5kb downstream 500 false Chr09: 16759716-16760215 Physcomitrium patens
Pp3c9_24620 1.0kb upstream 1.0kb upstream 1228 true Chr09: 16760216-16761443 Physcomitrium patens
Pp3c9_24620 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16760444-16761443 Physcomitrium patens
Pp3c9_24620 1.0kb downstream 1.0kb downstream 1228 true Chr09: 16759216-16760443 Physcomitrium patens
Pp3c9_24620 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16759216-16760215 Physcomitrium patens
Pp3c9_24620 2.0kb upstream 2.0kb upstream 2228 true Chr09: 16760216-16762443 Physcomitrium patens
Pp3c9_24620 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16760444-16762443 Physcomitrium patens
Pp3c9_24620 2.0kb downstream 2.0kb downstream 2228 true Chr09: 16758216-16760443 Physcomitrium patens
Pp3c9_24620 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16758216-16760215 Physcomitrium patens
Pp3c9_24620 5.0kb upstream 5.0kb upstream 5228 true Chr09: 16760216-16765443 Physcomitrium patens
Pp3c9_24620 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16760444-16765443 Physcomitrium patens
Pp3c9_24620 5.0kb downstream 5.0kb downstream 5228 true Chr09: 16755216-16760443 Physcomitrium patens
Pp3c9_24620 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16755216-16760215 Physcomitrium patens
Pp3c9_24620 10.0kb upstream 10.0kb upstream 10228 true Chr09: 16760216-16770443 Physcomitrium patens
Pp3c9_24620 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16760444-16770443 Physcomitrium patens
Pp3c9_24620 10.0kb downstream 10.0kb downstream 10228 true Chr09: 16750216-16760443 Physcomitrium patens
Pp3c9_24620 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16750216-16760215 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121326634 5274 Embryophyte Singleton cluster - no MSA
123363672 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.141       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain