Gene : Pp3c9_24800 P. patens v3.3
Defline:  (1 of 1) PTHR11926:SF207 - UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN Genomic Order:  1125
Name:  ? Pp3c9_24800 Secondary Identifier:  ? PAC:32911905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_24800 0.5kb upstream 0.5kb upstream 4047 true Chr09: 16821358-16825404 Physcomitrium patens
Pp3c9_24800 0.5kb upstream 0.5kb upstream 500 false Chr09: 16824905-16825404 Physcomitrium patens
Pp3c9_24800 0.5kb downstream 0.5kb downstream 4047 true Chr09: 16820858-16824904 Physcomitrium patens
Pp3c9_24800 0.5kb downstream 0.5kb downstream 500 false Chr09: 16820858-16821357 Physcomitrium patens
Pp3c9_24800 1.0kb upstream 1.0kb upstream 4547 true Chr09: 16821358-16825904 Physcomitrium patens
Pp3c9_24800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16824905-16825904 Physcomitrium patens
Pp3c9_24800 1.0kb downstream 1.0kb downstream 4547 true Chr09: 16820358-16824904 Physcomitrium patens
Pp3c9_24800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16820358-16821357 Physcomitrium patens
Pp3c9_24800 2.0kb upstream 2.0kb upstream 5547 true Chr09: 16821358-16826904 Physcomitrium patens
Pp3c9_24800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16824905-16826904 Physcomitrium patens
Pp3c9_24800 2.0kb downstream 2.0kb downstream 5547 true Chr09: 16819358-16824904 Physcomitrium patens
Pp3c9_24800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16819358-16821357 Physcomitrium patens
Pp3c9_24800 5.0kb upstream 5.0kb upstream 8547 true Chr09: 16821358-16829904 Physcomitrium patens
Pp3c9_24800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16824905-16829904 Physcomitrium patens
Pp3c9_24800 5.0kb downstream 5.0kb downstream 8547 true Chr09: 16816358-16824904 Physcomitrium patens
Pp3c9_24800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16816358-16821357 Physcomitrium patens
Pp3c9_24800 10.0kb upstream 10.0kb upstream 13547 true Chr09: 16821358-16834904 Physcomitrium patens
Pp3c9_24800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16824905-16834904 Physcomitrium patens
Pp3c9_24800 10.0kb downstream 10.0kb downstream 13547 true Chr09: 16811358-16824904 Physcomitrium patens
Pp3c9_24800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16811358-16821357 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343952 5274 Embryophyte View MSA
123379946 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.17       Low
cufflinks 0.33        
cufflinks 0.163       Low
cufflinks 0.357       High
cufflinks 0.295        
cufflinks 0.178       Low
cufflinks 0.244        
cufflinks 0.346       High
cufflinks 0.21        
cufflinks 0.235        
cufflinks 0.177       Low
cufflinks 0.154       Low
cufflinks 0.387       High
cufflinks 0.311        
cufflinks 0.302        
cufflinks 0.255        
cufflinks 0.383       High
cufflinks 0.214        
cufflinks 0.284        
cufflinks 0.281        
cufflinks 0.221        
cufflinks 0.21        
cufflinks 0.266        
cufflinks 0.302        
cufflinks 0.247        
cufflinks 0.364       High
cufflinks 0.261        
cufflinks 0.391       High
cufflinks 0.262        
cufflinks 0.264        

0 Strain