Gene : Pp3c9_21390 P. patens v3.3
Defline:  (1 of 1) PTHR16821 - FRATAXIN Genomic Order:  991
Name:  ? Pp3c9_21390 Secondary Identifier:  ? PAC:32911900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_21390 0.5kb upstream 0.5kb upstream 3521 true Chr09: 14358982-14362502 Physcomitrium patens
Pp3c9_21390 0.5kb upstream 0.5kb upstream 500 false Chr09: 14362003-14362502 Physcomitrium patens
Pp3c9_21390 0.5kb downstream 0.5kb downstream 3521 true Chr09: 14358482-14362002 Physcomitrium patens
Pp3c9_21390 0.5kb downstream 0.5kb downstream 500 false Chr09: 14358482-14358981 Physcomitrium patens
Pp3c9_21390 1.0kb upstream 1.0kb upstream 4021 true Chr09: 14358982-14363002 Physcomitrium patens
Pp3c9_21390 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14362003-14363002 Physcomitrium patens
Pp3c9_21390 1.0kb downstream 1.0kb downstream 4021 true Chr09: 14357982-14362002 Physcomitrium patens
Pp3c9_21390 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14357982-14358981 Physcomitrium patens
Pp3c9_21390 2.0kb upstream 2.0kb upstream 5021 true Chr09: 14358982-14364002 Physcomitrium patens
Pp3c9_21390 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14362003-14364002 Physcomitrium patens
Pp3c9_21390 2.0kb downstream 2.0kb downstream 5021 true Chr09: 14356982-14362002 Physcomitrium patens
Pp3c9_21390 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14356982-14358981 Physcomitrium patens
Pp3c9_21390 5.0kb upstream 5.0kb upstream 8021 true Chr09: 14358982-14367002 Physcomitrium patens
Pp3c9_21390 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14362003-14367002 Physcomitrium patens
Pp3c9_21390 5.0kb downstream 5.0kb downstream 8021 true Chr09: 14353982-14362002 Physcomitrium patens
Pp3c9_21390 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14353982-14358981 Physcomitrium patens
Pp3c9_21390 10.0kb upstream 10.0kb upstream 13021 true Chr09: 14358982-14372002 Physcomitrium patens
Pp3c9_21390 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14362003-14372002 Physcomitrium patens
Pp3c9_21390 10.0kb downstream 10.0kb downstream 13021 true Chr09: 14348982-14362002 Physcomitrium patens
Pp3c9_21390 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14348982-14358981 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346904 5274 Embryophyte View MSA
123425316 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.878        
cufflinks 2.108        
cufflinks 2.582        
cufflinks 2.44        
cufflinks 1.958        
cufflinks 2.337        
cufflinks 2.533        
cufflinks 2.248        
cufflinks 2.922       High
cufflinks 2.004        
cufflinks 1.972        
cufflinks 1.703       Low
cufflinks 2.619        
cufflinks 1.689       Low
cufflinks 2.623        
cufflinks 3.472       High
cufflinks 2.906       High
cufflinks 2.278        
cufflinks 2.109        
cufflinks 3.021       High
cufflinks 1.959        
cufflinks 1.986        
cufflinks 2.081        
cufflinks 1.875        
cufflinks 2.409        
cufflinks 1.896        
cufflinks 1.906        
cufflinks 2.35        
cufflinks 1.398       Low
cufflinks 2.605        

0 Strain