Gene : Pp3c9_21420 P. patens v3.3
Defline:  (1 of 1) PTHR12960 - GLE-1-RELATED Genomic Order:  994
Name:  ? Pp3c9_21420 Secondary Identifier:  ? PAC:32911692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_21420 0.5kb upstream 0.5kb upstream 5907 true Chr09: 14421576-14427482 Physcomitrium patens
Pp3c9_21420 0.5kb upstream 0.5kb upstream 500 false Chr09: 14426983-14427482 Physcomitrium patens
Pp3c9_21420 0.5kb downstream 0.5kb downstream 5907 true Chr09: 14421076-14426982 Physcomitrium patens
Pp3c9_21420 0.5kb downstream 0.5kb downstream 500 false Chr09: 14421076-14421575 Physcomitrium patens
Pp3c9_21420 1.0kb upstream 1.0kb upstream 6407 true Chr09: 14421576-14427982 Physcomitrium patens
Pp3c9_21420 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14426983-14427982 Physcomitrium patens
Pp3c9_21420 1.0kb downstream 1.0kb downstream 6407 true Chr09: 14420576-14426982 Physcomitrium patens
Pp3c9_21420 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14420576-14421575 Physcomitrium patens
Pp3c9_21420 2.0kb upstream 2.0kb upstream 7407 true Chr09: 14421576-14428982 Physcomitrium patens
Pp3c9_21420 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14426983-14428982 Physcomitrium patens
Pp3c9_21420 2.0kb downstream 2.0kb downstream 7407 true Chr09: 14419576-14426982 Physcomitrium patens
Pp3c9_21420 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14419576-14421575 Physcomitrium patens
Pp3c9_21420 5.0kb upstream 5.0kb upstream 10407 true Chr09: 14421576-14431982 Physcomitrium patens
Pp3c9_21420 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14426983-14431982 Physcomitrium patens
Pp3c9_21420 5.0kb downstream 5.0kb downstream 10407 true Chr09: 14416576-14426982 Physcomitrium patens
Pp3c9_21420 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14416576-14421575 Physcomitrium patens
Pp3c9_21420 10.0kb upstream 10.0kb upstream 15407 true Chr09: 14421576-14436982 Physcomitrium patens
Pp3c9_21420 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14426983-14436982 Physcomitrium patens
Pp3c9_21420 10.0kb downstream 10.0kb downstream 15407 true Chr09: 14411576-14426982 Physcomitrium patens
Pp3c9_21420 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14411576-14421575 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.921       Low
cufflinks 1.7        
cufflinks 1.732        
cufflinks 1.681        
cufflinks 2.189       High
cufflinks 1.68        
cufflinks 1.504        
cufflinks 1.838        
cufflinks 1.329        
cufflinks 1.618        
cufflinks 1.769        
cufflinks 2.107       High
cufflinks 1.239        
cufflinks 1.548        
cufflinks 1.161        
cufflinks 1.276        
cufflinks 1.067        
cufflinks 0.607       Low
cufflinks 1.605        
cufflinks 0.86       Low
cufflinks 1.456        
cufflinks 1.674        
cufflinks 1.745        
cufflinks 1.834        
cufflinks 0.82       Low
cufflinks 1.462        
cufflinks 0.811       Low
cufflinks 1.284        
cufflinks 0.68       Low
cufflinks 1.511        

0 Strain