Gene : Pp3c9_3630 P. patens v3.3
Defline:  (1 of 2) PTHR23123 - PHD/F-BOX CONTAINING PROTEIN Genomic Order:  181
Name:  ? Pp3c9_3630 Secondary Identifier:  ? PAC:32911116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_3630 0.5kb upstream 0.5kb upstream 7814 true Chr09: 2080144-2087957 Physcomitrium patens
Pp3c9_3630 0.5kb upstream 0.5kb upstream 500 false Chr09: 2080144-2080643 Physcomitrium patens
Pp3c9_3630 0.5kb downstream 0.5kb downstream 7814 true Chr09: 2080644-2088457 Physcomitrium patens
Pp3c9_3630 0.5kb downstream 0.5kb downstream 500 false Chr09: 2087958-2088457 Physcomitrium patens
Pp3c9_3630 1.0kb upstream 1.0kb upstream 8314 true Chr09: 2079644-2087957 Physcomitrium patens
Pp3c9_3630 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2079644-2080643 Physcomitrium patens
Pp3c9_3630 1.0kb downstream 1.0kb downstream 8314 true Chr09: 2080644-2088957 Physcomitrium patens
Pp3c9_3630 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2087958-2088957 Physcomitrium patens
Pp3c9_3630 2.0kb upstream 2.0kb upstream 9314 true Chr09: 2078644-2087957 Physcomitrium patens
Pp3c9_3630 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2078644-2080643 Physcomitrium patens
Pp3c9_3630 2.0kb downstream 2.0kb downstream 9314 true Chr09: 2080644-2089957 Physcomitrium patens
Pp3c9_3630 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2087958-2089957 Physcomitrium patens
Pp3c9_3630 5.0kb upstream 5.0kb upstream 12314 true Chr09: 2075644-2087957 Physcomitrium patens
Pp3c9_3630 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2075644-2080643 Physcomitrium patens
Pp3c9_3630 5.0kb downstream 5.0kb downstream 12314 true Chr09: 2080644-2092957 Physcomitrium patens
Pp3c9_3630 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2087958-2092957 Physcomitrium patens
Pp3c9_3630 10.0kb upstream 10.0kb upstream 17314 true Chr09: 2070644-2087957 Physcomitrium patens
Pp3c9_3630 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2070644-2080643 Physcomitrium patens
Pp3c9_3630 10.0kb downstream 10.0kb downstream 17314 true Chr09: 2080644-2097957 Physcomitrium patens
Pp3c9_3630 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2087958-2097957 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343109 5274 Embryophyte View MSA
123379449 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.465        
cufflinks 0.545        
cufflinks 0.377       Low
cufflinks 0.971       High
cufflinks 0.688        
cufflinks 0.224       Low
cufflinks 0.295       Low
cufflinks 0.638        
cufflinks 0.533        
cufflinks 0.359       Low
cufflinks 1.019       High
cufflinks 0.528        
cufflinks 0.589        
cufflinks 0.463        
cufflinks 0.603        
cufflinks 0.373       Low
cufflinks 0.675        
cufflinks 0.392       Low
cufflinks 0.609        
cufflinks 0.774        
cufflinks 0.437        
cufflinks 0.592        
cufflinks 0.972       High
cufflinks 0.819        
cufflinks 0.885       High
cufflinks 0.545        
cufflinks 0.638        
cufflinks 0.903       High
cufflinks 0.632        
cufflinks 0.538        

0 Strain