Gene : Pp3c9_3820 P. patens v3.3
Defline:  (1 of 3) PTHR12736 - LANC-LIKE PROTEIN Genomic Order:  195
Name:  ? Pp3c9_3820 Secondary Identifier:  ? PAC:32911835
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_3820 0.5kb upstream 0.5kb upstream 4013 true Chr09: 2188963-2192975 Physcomitrium patens
Pp3c9_3820 0.5kb upstream 0.5kb upstream 500 false Chr09: 2188963-2189462 Physcomitrium patens
Pp3c9_3820 0.5kb downstream 0.5kb downstream 4013 true Chr09: 2189463-2193475 Physcomitrium patens
Pp3c9_3820 0.5kb downstream 0.5kb downstream 500 false Chr09: 2192976-2193475 Physcomitrium patens
Pp3c9_3820 1.0kb upstream 1.0kb upstream 4513 true Chr09: 2188463-2192975 Physcomitrium patens
Pp3c9_3820 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2188463-2189462 Physcomitrium patens
Pp3c9_3820 1.0kb downstream 1.0kb downstream 4513 true Chr09: 2189463-2193975 Physcomitrium patens
Pp3c9_3820 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2192976-2193975 Physcomitrium patens
Pp3c9_3820 2.0kb upstream 2.0kb upstream 5513 true Chr09: 2187463-2192975 Physcomitrium patens
Pp3c9_3820 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2187463-2189462 Physcomitrium patens
Pp3c9_3820 2.0kb downstream 2.0kb downstream 5513 true Chr09: 2189463-2194975 Physcomitrium patens
Pp3c9_3820 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2192976-2194975 Physcomitrium patens
Pp3c9_3820 5.0kb upstream 5.0kb upstream 8513 true Chr09: 2184463-2192975 Physcomitrium patens
Pp3c9_3820 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2184463-2189462 Physcomitrium patens
Pp3c9_3820 5.0kb downstream 5.0kb downstream 8513 true Chr09: 2189463-2197975 Physcomitrium patens
Pp3c9_3820 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2192976-2197975 Physcomitrium patens
Pp3c9_3820 10.0kb upstream 10.0kb upstream 13513 true Chr09: 2179463-2192975 Physcomitrium patens
Pp3c9_3820 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2179463-2189462 Physcomitrium patens
Pp3c9_3820 10.0kb downstream 10.0kb downstream 13513 true Chr09: 2189463-2202975 Physcomitrium patens
Pp3c9_3820 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2192976-2202975 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.874        
cufflinks 0.304       Low
cufflinks 0.365       Low
cufflinks 3.232        
cufflinks 2.076        
cufflinks 32.698     High High
cufflinks 1.999        
cufflinks 14.665       High
cufflinks 13.914       High
cufflinks 4.401        
cufflinks 2.401        
cufflinks 0.693        
cufflinks 1.408        
cufflinks 0.251       Low
cufflinks 0.357       Low
cufflinks 2.612        
cufflinks 0.636        
cufflinks 0.422       Low
cufflinks 2.936        
cufflinks 0.392       Low
cufflinks 2.203        
cufflinks 33.113     High High
cufflinks 3.364        
cufflinks 1.655        
cufflinks 1.068        
cufflinks 4.305        
cufflinks 3.936        
cufflinks 4.138        
cufflinks 1.626        
cufflinks 1.323        

0 Strain