Gene : Pp3c10_13270 P. patens v3.3
Genomic Order:  639 Name:  ? Pp3c10_13270
Secondary Identifier:  ? PAC:32899900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_13270 0.5kb upstream 0.5kb upstream 2399 true Chr10: 8962734-8965132 Physcomitrium patens
Pp3c10_13270 0.5kb upstream 0.5kb upstream 500 false Chr10: 8962734-8963233 Physcomitrium patens
Pp3c10_13270 0.5kb downstream 0.5kb downstream 2399 true Chr10: 8963234-8965632 Physcomitrium patens
Pp3c10_13270 0.5kb downstream 0.5kb downstream 500 false Chr10: 8965133-8965632 Physcomitrium patens
Pp3c10_13270 1.0kb upstream 1.0kb upstream 2899 true Chr10: 8962234-8965132 Physcomitrium patens
Pp3c10_13270 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8962234-8963233 Physcomitrium patens
Pp3c10_13270 1.0kb downstream 1.0kb downstream 2899 true Chr10: 8963234-8966132 Physcomitrium patens
Pp3c10_13270 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8965133-8966132 Physcomitrium patens
Pp3c10_13270 2.0kb upstream 2.0kb upstream 3899 true Chr10: 8961234-8965132 Physcomitrium patens
Pp3c10_13270 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8961234-8963233 Physcomitrium patens
Pp3c10_13270 2.0kb downstream 2.0kb downstream 3899 true Chr10: 8963234-8967132 Physcomitrium patens
Pp3c10_13270 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8965133-8967132 Physcomitrium patens
Pp3c10_13270 5.0kb upstream 5.0kb upstream 6899 true Chr10: 8958234-8965132 Physcomitrium patens
Pp3c10_13270 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8958234-8963233 Physcomitrium patens
Pp3c10_13270 5.0kb downstream 5.0kb downstream 6899 true Chr10: 8963234-8970132 Physcomitrium patens
Pp3c10_13270 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8965133-8970132 Physcomitrium patens
Pp3c10_13270 10.0kb upstream 10.0kb upstream 11899 true Chr10: 8953234-8965132 Physcomitrium patens
Pp3c10_13270 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8953234-8963233 Physcomitrium patens
Pp3c10_13270 10.0kb downstream 10.0kb downstream 11899 true Chr10: 8963234-8975132 Physcomitrium patens
Pp3c10_13270 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8965133-8975132 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342929 5274 Embryophyte View MSA
123379328 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.033     Low  
cufflinks 0.198        
cufflinks 0.003     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.001     Low Low
cufflinks 2.203       High
cufflinks 0.002     Low  
cufflinks 0.113        
cufflinks 0.006     Low  
cufflinks 0.003     Low  
cufflinks 0.09        
cufflinks 0.002     Low  
cufflinks 0.011     Low  
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.005     Low  
cufflinks 0.011     Low  
cufflinks 0.093        
cufflinks 13.91     High High
cufflinks 0.015     Low  
cufflinks 10.983       High
cufflinks 0.003     Low  
cufflinks 16.343     High High
cufflinks 0.135        
cufflinks 0.001     Low Low
cufflinks 0.005     Low  
cufflinks 0.01     Low  

0 Strain