Gene : Pp3c10_20230 P. patens v3.3
Defline:  (1 of 1) PTHR10870 - CELL CYCLE CHECKPOINT PROTEIN RAD1 Genomic Order:  969
Name:  ? Pp3c10_20230 Secondary Identifier:  ? PAC:32900958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_20230 0.5kb upstream 0.5kb upstream 5235 true Chr10: 13951547-13956781 Physcomitrium patens
Pp3c10_20230 0.5kb upstream 0.5kb upstream 500 false Chr10: 13951547-13952046 Physcomitrium patens
Pp3c10_20230 0.5kb downstream 0.5kb downstream 5235 true Chr10: 13952047-13957281 Physcomitrium patens
Pp3c10_20230 0.5kb downstream 0.5kb downstream 500 false Chr10: 13956782-13957281 Physcomitrium patens
Pp3c10_20230 1.0kb upstream 1.0kb upstream 5735 true Chr10: 13951047-13956781 Physcomitrium patens
Pp3c10_20230 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13951047-13952046 Physcomitrium patens
Pp3c10_20230 1.0kb downstream 1.0kb downstream 5735 true Chr10: 13952047-13957781 Physcomitrium patens
Pp3c10_20230 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13956782-13957781 Physcomitrium patens
Pp3c10_20230 2.0kb upstream 2.0kb upstream 6735 true Chr10: 13950047-13956781 Physcomitrium patens
Pp3c10_20230 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13950047-13952046 Physcomitrium patens
Pp3c10_20230 2.0kb downstream 2.0kb downstream 6735 true Chr10: 13952047-13958781 Physcomitrium patens
Pp3c10_20230 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13956782-13958781 Physcomitrium patens
Pp3c10_20230 5.0kb upstream 5.0kb upstream 9735 true Chr10: 13947047-13956781 Physcomitrium patens
Pp3c10_20230 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13947047-13952046 Physcomitrium patens
Pp3c10_20230 5.0kb downstream 5.0kb downstream 9735 true Chr10: 13952047-13961781 Physcomitrium patens
Pp3c10_20230 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13956782-13961781 Physcomitrium patens
Pp3c10_20230 10.0kb upstream 10.0kb upstream 14735 true Chr10: 13942047-13956781 Physcomitrium patens
Pp3c10_20230 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13942047-13952046 Physcomitrium patens
Pp3c10_20230 10.0kb downstream 10.0kb downstream 14735 true Chr10: 13952047-13966781 Physcomitrium patens
Pp3c10_20230 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13956782-13966781 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344103 5274 Embryophyte View MSA
123425260 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.525        
cufflinks 0.97       High
cufflinks 0.653        
cufflinks 0.728        
cufflinks 0.725        
cufflinks 0.758        
cufflinks 0.658        
cufflinks 0.419       Low
cufflinks 0.752        
cufflinks 0.661        
cufflinks 0.619        
cufflinks 0.429       Low
cufflinks 1.01       High
cufflinks 0.722        
cufflinks 0.61        
cufflinks 0.969       High
cufflinks 0.497        
cufflinks 0.588        
cufflinks 0.337       Low
cufflinks 0.707        
cufflinks 0.825        
cufflinks 0.627        
cufflinks 0.322       Low
cufflinks 0.666        
cufflinks 0.961       High
cufflinks 0.689        
cufflinks 0.822        
cufflinks 0.885       High
cufflinks 0.498        
cufflinks 0.652        

0 Strain