Gene : Pp3c10_20870 P. patens v3.3
Defline:  (1 of 1) PTHR20922:SF13 - DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  1011
Name:  ? Pp3c10_20870 Secondary Identifier:  ? PAC:32902245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_20870 0.5kb upstream 0.5kb upstream 2572 true Chr10: 14335597-14338168 Physcomitrium patens
Pp3c10_20870 0.5kb upstream 0.5kb upstream 500 false Chr10: 14337669-14338168 Physcomitrium patens
Pp3c10_20870 0.5kb downstream 0.5kb downstream 2572 true Chr10: 14335097-14337668 Physcomitrium patens
Pp3c10_20870 0.5kb downstream 0.5kb downstream 500 false Chr10: 14335097-14335596 Physcomitrium patens
Pp3c10_20870 1.0kb upstream 1.0kb upstream 3072 true Chr10: 14335597-14338668 Physcomitrium patens
Pp3c10_20870 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14337669-14338668 Physcomitrium patens
Pp3c10_20870 1.0kb downstream 1.0kb downstream 3072 true Chr10: 14334597-14337668 Physcomitrium patens
Pp3c10_20870 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14334597-14335596 Physcomitrium patens
Pp3c10_20870 2.0kb upstream 2.0kb upstream 4072 true Chr10: 14335597-14339668 Physcomitrium patens
Pp3c10_20870 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14337669-14339668 Physcomitrium patens
Pp3c10_20870 2.0kb downstream 2.0kb downstream 4072 true Chr10: 14333597-14337668 Physcomitrium patens
Pp3c10_20870 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14333597-14335596 Physcomitrium patens
Pp3c10_20870 5.0kb upstream 5.0kb upstream 7072 true Chr10: 14335597-14342668 Physcomitrium patens
Pp3c10_20870 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14337669-14342668 Physcomitrium patens
Pp3c10_20870 5.0kb downstream 5.0kb downstream 7072 true Chr10: 14330597-14337668 Physcomitrium patens
Pp3c10_20870 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14330597-14335596 Physcomitrium patens
Pp3c10_20870 10.0kb upstream 10.0kb upstream 12072 true Chr10: 14335597-14347668 Physcomitrium patens
Pp3c10_20870 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14337669-14347668 Physcomitrium patens
Pp3c10_20870 10.0kb downstream 10.0kb downstream 12072 true Chr10: 14325597-14337668 Physcomitrium patens
Pp3c10_20870 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14325597-14335596 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.879        
cufflinks 6.7        
cufflinks 32.752     High High
cufflinks 11.855       High
cufflinks 7.218        
cufflinks 7.84        
cufflinks 7.209        
cufflinks 7.252        
cufflinks 7.306        
cufflinks 7.153        
cufflinks 6.646        
cufflinks 16.805       High
cufflinks 7.822        
cufflinks 14.457       High
cufflinks 8.359        
cufflinks 5.786        
cufflinks 6.355        
cufflinks 6.194        
cufflinks 10.699        
cufflinks 9.078        
cufflinks 6.139        
cufflinks 6.804        
cufflinks 13.632       High
cufflinks 6.699        
cufflinks 6.578        
cufflinks 6.782        
cufflinks 6.624        
cufflinks 10.694        
cufflinks 6.593        
cufflinks 6.778        

0 Strain