Gene : Pp3c10_15580 P. patens v3.3
Defline:  (1 of 1) PTHR20858:SF18 - PROTEIN PET18 Genomic Order:  733
Name:  ? Pp3c10_15580 Secondary Identifier:  ? PAC:32902716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_15580 0.5kb upstream 0.5kb upstream 2595 true Chr10: 10457398-10459992 Physcomitrium patens
Pp3c10_15580 0.5kb upstream 0.5kb upstream 500 false Chr10: 10459493-10459992 Physcomitrium patens
Pp3c10_15580 0.5kb downstream 0.5kb downstream 2595 true Chr10: 10456898-10459492 Physcomitrium patens
Pp3c10_15580 0.5kb downstream 0.5kb downstream 500 false Chr10: 10456898-10457397 Physcomitrium patens
Pp3c10_15580 1.0kb upstream 1.0kb upstream 3095 true Chr10: 10457398-10460492 Physcomitrium patens
Pp3c10_15580 1.0kb upstream 1.0kb upstream 1000 false Chr10: 10459493-10460492 Physcomitrium patens
Pp3c10_15580 1.0kb downstream 1.0kb downstream 3095 true Chr10: 10456398-10459492 Physcomitrium patens
Pp3c10_15580 1.0kb downstream 1.0kb downstream 1000 false Chr10: 10456398-10457397 Physcomitrium patens
Pp3c10_15580 2.0kb upstream 2.0kb upstream 4095 true Chr10: 10457398-10461492 Physcomitrium patens
Pp3c10_15580 2.0kb upstream 2.0kb upstream 2000 false Chr10: 10459493-10461492 Physcomitrium patens
Pp3c10_15580 2.0kb downstream 2.0kb downstream 4095 true Chr10: 10455398-10459492 Physcomitrium patens
Pp3c10_15580 2.0kb downstream 2.0kb downstream 2000 false Chr10: 10455398-10457397 Physcomitrium patens
Pp3c10_15580 5.0kb upstream 5.0kb upstream 7095 true Chr10: 10457398-10464492 Physcomitrium patens
Pp3c10_15580 5.0kb upstream 5.0kb upstream 5000 false Chr10: 10459493-10464492 Physcomitrium patens
Pp3c10_15580 5.0kb downstream 5.0kb downstream 7095 true Chr10: 10452398-10459492 Physcomitrium patens
Pp3c10_15580 5.0kb downstream 5.0kb downstream 5000 false Chr10: 10452398-10457397 Physcomitrium patens
Pp3c10_15580 10.0kb upstream 10.0kb upstream 12095 true Chr10: 10457398-10469492 Physcomitrium patens
Pp3c10_15580 10.0kb upstream 10.0kb upstream 10000 false Chr10: 10459493-10469492 Physcomitrium patens
Pp3c10_15580 10.0kb downstream 10.0kb downstream 12095 true Chr10: 10447398-10459492 Physcomitrium patens
Pp3c10_15580 10.0kb downstream 10.0kb downstream 10000 false Chr10: 10447398-10457397 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.872        
cufflinks 49.164     High High
cufflinks 5.473        
cufflinks 9.114        
cufflinks 12.709        
cufflinks 37.344     High High
cufflinks 12.891        
cufflinks 5.747        
cufflinks 36.203     High High
cufflinks 6.795        
cufflinks 10.453        
cufflinks 5.067       Low
cufflinks 7.721        
cufflinks 4.905       Low
cufflinks 9.528        
cufflinks 5.132        
cufflinks 15.838        
cufflinks 7.158        
cufflinks 9.371        
cufflinks 10.672        
cufflinks 4.588       Low
cufflinks 15.928        
cufflinks 9.027        
cufflinks 4.768       Low
cufflinks 6.932        
cufflinks 7.992        
cufflinks 48.39     High High
cufflinks 6.476        
cufflinks 11.152        
cufflinks 17.856        

0 Strain