Gene : Pp3c10_15650 P. patens v3.3
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  735
Name:  ? Pp3c10_15650 Secondary Identifier:  ? PAC:32900925
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens ARG-PRO-PWY Physcomitrium patens pathologic  
Ppatens PROSYN-PWY Physcomitrium patens pathologic  
Ppatens PWY-3341 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_15650 0.5kb upstream 0.5kb upstream 5154 true Chr10: 10512485-10517638 Physcomitrium patens
Pp3c10_15650 0.5kb upstream 0.5kb upstream 500 false Chr10: 10517139-10517638 Physcomitrium patens
Pp3c10_15650 0.5kb downstream 0.5kb downstream 5154 true Chr10: 10511985-10517138 Physcomitrium patens
Pp3c10_15650 0.5kb downstream 0.5kb downstream 500 false Chr10: 10511985-10512484 Physcomitrium patens
Pp3c10_15650 1.0kb upstream 1.0kb upstream 5654 true Chr10: 10512485-10518138 Physcomitrium patens
Pp3c10_15650 1.0kb upstream 1.0kb upstream 1000 false Chr10: 10517139-10518138 Physcomitrium patens
Pp3c10_15650 1.0kb downstream 1.0kb downstream 5654 true Chr10: 10511485-10517138 Physcomitrium patens
Pp3c10_15650 1.0kb downstream 1.0kb downstream 1000 false Chr10: 10511485-10512484 Physcomitrium patens
Pp3c10_15650 2.0kb upstream 2.0kb upstream 6654 true Chr10: 10512485-10519138 Physcomitrium patens
Pp3c10_15650 2.0kb upstream 2.0kb upstream 2000 false Chr10: 10517139-10519138 Physcomitrium patens
Pp3c10_15650 2.0kb downstream 2.0kb downstream 6654 true Chr10: 10510485-10517138 Physcomitrium patens
Pp3c10_15650 2.0kb downstream 2.0kb downstream 2000 false Chr10: 10510485-10512484 Physcomitrium patens
Pp3c10_15650 5.0kb upstream 5.0kb upstream 9654 true Chr10: 10512485-10522138 Physcomitrium patens
Pp3c10_15650 5.0kb upstream 5.0kb upstream 5000 false Chr10: 10517139-10522138 Physcomitrium patens
Pp3c10_15650 5.0kb downstream 5.0kb downstream 9654 true Chr10: 10507485-10517138 Physcomitrium patens
Pp3c10_15650 5.0kb downstream 5.0kb downstream 5000 false Chr10: 10507485-10512484 Physcomitrium patens
Pp3c10_15650 10.0kb upstream 10.0kb upstream 14654 true Chr10: 10512485-10527138 Physcomitrium patens
Pp3c10_15650 10.0kb upstream 10.0kb upstream 10000 false Chr10: 10517139-10527138 Physcomitrium patens
Pp3c10_15650 10.0kb downstream 10.0kb downstream 14654 true Chr10: 10502485-10517138 Physcomitrium patens
Pp3c10_15650 10.0kb downstream 10.0kb downstream 10000 false Chr10: 10502485-10512484 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.998        
cufflinks 1.564       Low
cufflinks 2.139        
cufflinks 2.464        
cufflinks 2.918        
cufflinks 2.728        
cufflinks 2.728        
cufflinks 3.901       High
cufflinks 2.066        
cufflinks 2.118        
cufflinks 3.421       High
cufflinks 1.43       Low
cufflinks 2.623        
cufflinks 3.355       High
cufflinks 2.516        
cufflinks 2.75        
cufflinks 1.926        
cufflinks 3.036        
cufflinks 1.654       Low
cufflinks 2.363        
cufflinks 3.207       High
cufflinks 2.242        
cufflinks 1.645       Low
cufflinks 1.466       Low
cufflinks 2.583        
cufflinks 1.905        
cufflinks 3.256       High
cufflinks 1.549       Low
cufflinks 2.259        
cufflinks 3.635       High

0 Strain