Gene : Pp3c10_2820 P. patens v3.3
Defline:  (1 of 1) PF00069//PF02743//PF13519 - Protein kinase domain (Pkinase) // Cache domain (Cache_1) // von Willebrand factor type A domain (VWA_2) Genomic Order:  123
Name:  ? Pp3c10_2820 Secondary Identifier:  ? PAC:32902260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_2820 0.5kb upstream 0.5kb upstream 8385 true Chr10: 2285019-2293403 Physcomitrium patens
Pp3c10_2820 0.5kb upstream 0.5kb upstream 500 false Chr10: 2285019-2285518 Physcomitrium patens
Pp3c10_2820 0.5kb downstream 0.5kb downstream 8385 true Chr10: 2285519-2293903 Physcomitrium patens
Pp3c10_2820 0.5kb downstream 0.5kb downstream 500 false Chr10: 2293404-2293903 Physcomitrium patens
Pp3c10_2820 1.0kb upstream 1.0kb upstream 8885 true Chr10: 2284519-2293403 Physcomitrium patens
Pp3c10_2820 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2284519-2285518 Physcomitrium patens
Pp3c10_2820 1.0kb downstream 1.0kb downstream 8885 true Chr10: 2285519-2294403 Physcomitrium patens
Pp3c10_2820 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2293404-2294403 Physcomitrium patens
Pp3c10_2820 2.0kb upstream 2.0kb upstream 9885 true Chr10: 2283519-2293403 Physcomitrium patens
Pp3c10_2820 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2283519-2285518 Physcomitrium patens
Pp3c10_2820 2.0kb downstream 2.0kb downstream 9885 true Chr10: 2285519-2295403 Physcomitrium patens
Pp3c10_2820 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2293404-2295403 Physcomitrium patens
Pp3c10_2820 5.0kb upstream 5.0kb upstream 12885 true Chr10: 2280519-2293403 Physcomitrium patens
Pp3c10_2820 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2280519-2285518 Physcomitrium patens
Pp3c10_2820 5.0kb downstream 5.0kb downstream 12885 true Chr10: 2285519-2298403 Physcomitrium patens
Pp3c10_2820 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2293404-2298403 Physcomitrium patens
Pp3c10_2820 10.0kb upstream 10.0kb upstream 17885 true Chr10: 2275519-2293403 Physcomitrium patens
Pp3c10_2820 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2275519-2285518 Physcomitrium patens
Pp3c10_2820 10.0kb downstream 10.0kb downstream 17885 true Chr10: 2285519-2303403 Physcomitrium patens
Pp3c10_2820 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2293404-2303403 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336535 5274 Embryophyte View MSA
123373358 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.974       Low
cufflinks 2.07        
cufflinks 0.309       Low
cufflinks 5.469        
cufflinks 3.441        
cufflinks 1.777        
cufflinks 2.401        
cufflinks 4.357        
cufflinks 2.218        
cufflinks 2.394        
cufflinks 3.517        
cufflinks 11.253       High
cufflinks 9.196       High
cufflinks 3.394        
cufflinks 5.54        
cufflinks 6.711       High
cufflinks 1.805        
cufflinks 3.787        
cufflinks 2.042        
cufflinks 2.598        
cufflinks 2.608        
cufflinks 2.739        
cufflinks 5.632        
cufflinks 2.015        
cufflinks 0.259       Low
cufflinks 3.227        
cufflinks 5.843        
cufflinks 0.29       Low
cufflinks 5.578        
cufflinks 1.412        

0 Strain