Gene : Pp3c10_21330 P. patens v3.3
Defline:  (1 of 1) KOG2356 - Transcriptional activator, adenine-specific DNA methyltransferase Genomic Order:  1035
Name:  ? Pp3c10_21330 Secondary Identifier:  ? PAC:32899696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_21330 0.5kb upstream 0.5kb upstream 4699 true Chr10: 14712075-14716773 Physcomitrium patens
Pp3c10_21330 0.5kb upstream 0.5kb upstream 500 false Chr10: 14716274-14716773 Physcomitrium patens
Pp3c10_21330 0.5kb downstream 0.5kb downstream 4699 true Chr10: 14711575-14716273 Physcomitrium patens
Pp3c10_21330 0.5kb downstream 0.5kb downstream 500 false Chr10: 14711575-14712074 Physcomitrium patens
Pp3c10_21330 1.0kb upstream 1.0kb upstream 5199 true Chr10: 14712075-14717273 Physcomitrium patens
Pp3c10_21330 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14716274-14717273 Physcomitrium patens
Pp3c10_21330 1.0kb downstream 1.0kb downstream 5199 true Chr10: 14711075-14716273 Physcomitrium patens
Pp3c10_21330 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14711075-14712074 Physcomitrium patens
Pp3c10_21330 2.0kb upstream 2.0kb upstream 6199 true Chr10: 14712075-14718273 Physcomitrium patens
Pp3c10_21330 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14716274-14718273 Physcomitrium patens
Pp3c10_21330 2.0kb downstream 2.0kb downstream 6199 true Chr10: 14710075-14716273 Physcomitrium patens
Pp3c10_21330 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14710075-14712074 Physcomitrium patens
Pp3c10_21330 5.0kb upstream 5.0kb upstream 9199 true Chr10: 14712075-14721273 Physcomitrium patens
Pp3c10_21330 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14716274-14721273 Physcomitrium patens
Pp3c10_21330 5.0kb downstream 5.0kb downstream 9199 true Chr10: 14707075-14716273 Physcomitrium patens
Pp3c10_21330 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14707075-14712074 Physcomitrium patens
Pp3c10_21330 10.0kb upstream 10.0kb upstream 14199 true Chr10: 14712075-14726273 Physcomitrium patens
Pp3c10_21330 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14716274-14726273 Physcomitrium patens
Pp3c10_21330 10.0kb downstream 10.0kb downstream 14199 true Chr10: 14702075-14716273 Physcomitrium patens
Pp3c10_21330 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14702075-14712074 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344904 5274 Embryophyte View MSA
123380126 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.478       Low
cufflinks 1.411        
cufflinks 0.573       Low
cufflinks 1.119        
cufflinks 0.865        
cufflinks 3.925       High
cufflinks 1.814        
cufflinks 1.406        
cufflinks 1.398        
cufflinks 0.7        
cufflinks 1.32        
cufflinks 0.647       Low
cufflinks 1.46        
cufflinks 0.805        
cufflinks 0.796        
cufflinks 0.366       Low
cufflinks 1.094        
cufflinks 1.003        
cufflinks 1.371        
cufflinks 1.442        
cufflinks 1.01        
cufflinks 1.278        
cufflinks 0.773        
cufflinks 1.257        
cufflinks 2.423       High
cufflinks 1.466        
cufflinks 1.156        
cufflinks 0.706        
cufflinks 1.597        
cufflinks 0.715        

0 Strain