Gene : Pp3c10_8520 P. patens v3.3
Defline:  (1 of 1) KOG4774 - Uncharacterized conserved protein Genomic Order:  418
Name:  ? Pp3c10_8520 Secondary Identifier:  ? PAC:32901182
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_8520 0.5kb upstream 0.5kb upstream 3189 true Chr10: 5651095-5654283 Physcomitrium patens
Pp3c10_8520 0.5kb upstream 0.5kb upstream 500 false Chr10: 5651095-5651594 Physcomitrium patens
Pp3c10_8520 0.5kb downstream 0.5kb downstream 3189 true Chr10: 5651595-5654783 Physcomitrium patens
Pp3c10_8520 0.5kb downstream 0.5kb downstream 500 false Chr10: 5654284-5654783 Physcomitrium patens
Pp3c10_8520 1.0kb upstream 1.0kb upstream 3689 true Chr10: 5650595-5654283 Physcomitrium patens
Pp3c10_8520 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5650595-5651594 Physcomitrium patens
Pp3c10_8520 1.0kb downstream 1.0kb downstream 3689 true Chr10: 5651595-5655283 Physcomitrium patens
Pp3c10_8520 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5654284-5655283 Physcomitrium patens
Pp3c10_8520 2.0kb upstream 2.0kb upstream 4689 true Chr10: 5649595-5654283 Physcomitrium patens
Pp3c10_8520 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5649595-5651594 Physcomitrium patens
Pp3c10_8520 2.0kb downstream 2.0kb downstream 4689 true Chr10: 5651595-5656283 Physcomitrium patens
Pp3c10_8520 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5654284-5656283 Physcomitrium patens
Pp3c10_8520 5.0kb upstream 5.0kb upstream 7689 true Chr10: 5646595-5654283 Physcomitrium patens
Pp3c10_8520 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5646595-5651594 Physcomitrium patens
Pp3c10_8520 5.0kb downstream 5.0kb downstream 7689 true Chr10: 5651595-5659283 Physcomitrium patens
Pp3c10_8520 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5654284-5659283 Physcomitrium patens
Pp3c10_8520 10.0kb upstream 10.0kb upstream 12689 true Chr10: 5641595-5654283 Physcomitrium patens
Pp3c10_8520 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5641595-5651594 Physcomitrium patens
Pp3c10_8520 10.0kb downstream 10.0kb downstream 12689 true Chr10: 5651595-5664283 Physcomitrium patens
Pp3c10_8520 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5654284-5664283 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.507        
cufflinks 2.385       Low
cufflinks 3.566        
cufflinks 2.846        
cufflinks 5.998       High
cufflinks 4.823        
cufflinks 3.792        
cufflinks 3.561        
cufflinks 3.198        
cufflinks 5.793       High
cufflinks 5.83       High
cufflinks 2.956        
cufflinks 3.445        
cufflinks 4.138        
cufflinks 4.541        
cufflinks 2.475       Low
cufflinks 3.549        
cufflinks 3.331        
cufflinks 3.503        
cufflinks 2.688        
cufflinks 5.497       High
cufflinks 6.455       High
cufflinks 2.082       Low
cufflinks 3.605        
cufflinks 5.733       High
cufflinks 2.602       Low
cufflinks 2.451       Low
cufflinks 2.656        
cufflinks 2.956        
cufflinks 2.492       Low

0 Strain