Gene : Pp3c10_4360 P. patens v3.3
Defline:  (1 of 3) PF05217 - STOP protein (STOP) Genomic Order:  212
Name:  ? Pp3c10_4360 Secondary Identifier:  ? PAC:32901659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_4360 0.5kb upstream 0.5kb upstream 1763 true Chr10: 3124787-3126549 Physcomitrium patens
Pp3c10_4360 0.5kb upstream 0.5kb upstream 500 false Chr10: 3124787-3125286 Physcomitrium patens
Pp3c10_4360 0.5kb downstream 0.5kb downstream 1763 true Chr10: 3125287-3127049 Physcomitrium patens
Pp3c10_4360 0.5kb downstream 0.5kb downstream 500 false Chr10: 3126550-3127049 Physcomitrium patens
Pp3c10_4360 1.0kb upstream 1.0kb upstream 2263 true Chr10: 3124287-3126549 Physcomitrium patens
Pp3c10_4360 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3124287-3125286 Physcomitrium patens
Pp3c10_4360 1.0kb downstream 1.0kb downstream 2263 true Chr10: 3125287-3127549 Physcomitrium patens
Pp3c10_4360 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3126550-3127549 Physcomitrium patens
Pp3c10_4360 2.0kb upstream 2.0kb upstream 3263 true Chr10: 3123287-3126549 Physcomitrium patens
Pp3c10_4360 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3123287-3125286 Physcomitrium patens
Pp3c10_4360 2.0kb downstream 2.0kb downstream 3263 true Chr10: 3125287-3128549 Physcomitrium patens
Pp3c10_4360 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3126550-3128549 Physcomitrium patens
Pp3c10_4360 5.0kb upstream 5.0kb upstream 6263 true Chr10: 3120287-3126549 Physcomitrium patens
Pp3c10_4360 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3120287-3125286 Physcomitrium patens
Pp3c10_4360 5.0kb downstream 5.0kb downstream 6263 true Chr10: 3125287-3131549 Physcomitrium patens
Pp3c10_4360 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3126550-3131549 Physcomitrium patens
Pp3c10_4360 10.0kb upstream 10.0kb upstream 11263 true Chr10: 3115287-3126549 Physcomitrium patens
Pp3c10_4360 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3115287-3125286 Physcomitrium patens
Pp3c10_4360 10.0kb downstream 10.0kb downstream 11263 true Chr10: 3125287-3136549 Physcomitrium patens
Pp3c10_4360 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3126550-3136549 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343445 5274 Embryophyte View MSA
123379678 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low High
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain