Gene : Pp3c10_4900 P. patens v3.3
Genomic Order:  241 Name:  ? Pp3c10_4900
Secondary Identifier:  ? PAC:32900767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_4900 0.5kb upstream 0.5kb upstream 3228 true Chr10: 3360276-3363503 Physcomitrium patens
Pp3c10_4900 0.5kb upstream 0.5kb upstream 500 false Chr10: 3360276-3360775 Physcomitrium patens
Pp3c10_4900 0.5kb downstream 0.5kb downstream 3228 true Chr10: 3360776-3364003 Physcomitrium patens
Pp3c10_4900 0.5kb downstream 0.5kb downstream 500 false Chr10: 3363504-3364003 Physcomitrium patens
Pp3c10_4900 1.0kb upstream 1.0kb upstream 3728 true Chr10: 3359776-3363503 Physcomitrium patens
Pp3c10_4900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3359776-3360775 Physcomitrium patens
Pp3c10_4900 1.0kb downstream 1.0kb downstream 3728 true Chr10: 3360776-3364503 Physcomitrium patens
Pp3c10_4900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3363504-3364503 Physcomitrium patens
Pp3c10_4900 2.0kb upstream 2.0kb upstream 4728 true Chr10: 3358776-3363503 Physcomitrium patens
Pp3c10_4900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3358776-3360775 Physcomitrium patens
Pp3c10_4900 2.0kb downstream 2.0kb downstream 4728 true Chr10: 3360776-3365503 Physcomitrium patens
Pp3c10_4900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3363504-3365503 Physcomitrium patens
Pp3c10_4900 5.0kb upstream 5.0kb upstream 7728 true Chr10: 3355776-3363503 Physcomitrium patens
Pp3c10_4900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3355776-3360775 Physcomitrium patens
Pp3c10_4900 5.0kb downstream 5.0kb downstream 7728 true Chr10: 3360776-3368503 Physcomitrium patens
Pp3c10_4900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3363504-3368503 Physcomitrium patens
Pp3c10_4900 10.0kb upstream 10.0kb upstream 12728 true Chr10: 3350776-3363503 Physcomitrium patens
Pp3c10_4900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3350776-3360775 Physcomitrium patens
Pp3c10_4900 10.0kb downstream 10.0kb downstream 12728 true Chr10: 3360776-3373503 Physcomitrium patens
Pp3c10_4900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3363504-3373503 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342982 5274 Embryophyte View MSA
123379356 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.537     High  
cufflinks 17.637        
cufflinks 21.216        
cufflinks 17.432        
cufflinks 8.002        
cufflinks 1.073        
cufflinks 19.649        
cufflinks 0.017     Low Low
cufflinks 19.119        
cufflinks 2.304        
cufflinks 29.707     High  
cufflinks 36.345     High  
cufflinks 26.858     High  
cufflinks 0.03     Low Low
cufflinks 47.083     High  
cufflinks 23.008     High  
cufflinks 14.783        
cufflinks 11.767        
cufflinks 44.207     High  
cufflinks 30.495     High  
cufflinks 14.288        
cufflinks 16.599        
cufflinks 3.505        
cufflinks 0.581       Low
cufflinks 3.551        
cufflinks 15.558        
cufflinks 0.131       Low
cufflinks 12.147        
cufflinks 2.02        
cufflinks 8.594        

0 Strain