Gene : Pp3c10_9140 P. patens v3.3
Defline:  (1 of 3) PTHR21094:SF1 - GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  447
Name:  ? Pp3c10_9140 Secondary Identifier:  ? PAC:32899903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c10_9140 0.5kb upstream 0.5kb upstream 1520 true Chr10: 6116630-6118149 Physcomitrium patens
Pp3c10_9140 0.5kb upstream 0.5kb upstream 500 false Chr10: 6117650-6118149 Physcomitrium patens
Pp3c10_9140 0.5kb downstream 0.5kb downstream 1520 true Chr10: 6116130-6117649 Physcomitrium patens
Pp3c10_9140 0.5kb downstream 0.5kb downstream 500 false Chr10: 6116130-6116629 Physcomitrium patens
Pp3c10_9140 1.0kb upstream 1.0kb upstream 2020 true Chr10: 6116630-6118649 Physcomitrium patens
Pp3c10_9140 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6117650-6118649 Physcomitrium patens
Pp3c10_9140 1.0kb downstream 1.0kb downstream 2020 true Chr10: 6115630-6117649 Physcomitrium patens
Pp3c10_9140 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6115630-6116629 Physcomitrium patens
Pp3c10_9140 2.0kb upstream 2.0kb upstream 3020 true Chr10: 6116630-6119649 Physcomitrium patens
Pp3c10_9140 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6117650-6119649 Physcomitrium patens
Pp3c10_9140 2.0kb downstream 2.0kb downstream 3020 true Chr10: 6114630-6117649 Physcomitrium patens
Pp3c10_9140 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6114630-6116629 Physcomitrium patens
Pp3c10_9140 5.0kb upstream 5.0kb upstream 6020 true Chr10: 6116630-6122649 Physcomitrium patens
Pp3c10_9140 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6117650-6122649 Physcomitrium patens
Pp3c10_9140 5.0kb downstream 5.0kb downstream 6020 true Chr10: 6111630-6117649 Physcomitrium patens
Pp3c10_9140 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6111630-6116629 Physcomitrium patens
Pp3c10_9140 10.0kb upstream 10.0kb upstream 11020 true Chr10: 6116630-6127649 Physcomitrium patens
Pp3c10_9140 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6117650-6127649 Physcomitrium patens
Pp3c10_9140 10.0kb downstream 10.0kb downstream 11020 true Chr10: 6106630-6117649 Physcomitrium patens
Pp3c10_9140 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6106630-6116629 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351218 5274 Embryophyte View MSA
123382059 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain