Gene : Pp3c11_11020 P. patens v3.3
Defline:  (1 of 5) PTHR24073:SF509 - RAS-RELATED PROTEIN RAB-21 Genomic Order:  526
Name:  ? Pp3c11_11020 Secondary Identifier:  ? PAC:32957336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c11_11020 0.5kb upstream 0.5kb upstream 2757 true Chr11: 7110062-7112818 Physcomitrium patens
Pp3c11_11020 0.5kb upstream 0.5kb upstream 500 false Chr11: 7110062-7110561 Physcomitrium patens
Pp3c11_11020 0.5kb downstream 0.5kb downstream 2757 true Chr11: 7110562-7113318 Physcomitrium patens
Pp3c11_11020 0.5kb downstream 0.5kb downstream 500 false Chr11: 7112819-7113318 Physcomitrium patens
Pp3c11_11020 1.0kb upstream 1.0kb upstream 3257 true Chr11: 7109562-7112818 Physcomitrium patens
Pp3c11_11020 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7109562-7110561 Physcomitrium patens
Pp3c11_11020 1.0kb downstream 1.0kb downstream 3257 true Chr11: 7110562-7113818 Physcomitrium patens
Pp3c11_11020 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7112819-7113818 Physcomitrium patens
Pp3c11_11020 2.0kb upstream 2.0kb upstream 4257 true Chr11: 7108562-7112818 Physcomitrium patens
Pp3c11_11020 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7108562-7110561 Physcomitrium patens
Pp3c11_11020 2.0kb downstream 2.0kb downstream 4257 true Chr11: 7110562-7114818 Physcomitrium patens
Pp3c11_11020 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7112819-7114818 Physcomitrium patens
Pp3c11_11020 5.0kb upstream 5.0kb upstream 7257 true Chr11: 7105562-7112818 Physcomitrium patens
Pp3c11_11020 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7105562-7110561 Physcomitrium patens
Pp3c11_11020 5.0kb downstream 5.0kb downstream 7257 true Chr11: 7110562-7117818 Physcomitrium patens
Pp3c11_11020 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7112819-7117818 Physcomitrium patens
Pp3c11_11020 10.0kb upstream 10.0kb upstream 12257 true Chr11: 7100562-7112818 Physcomitrium patens
Pp3c11_11020 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7100562-7110561 Physcomitrium patens
Pp3c11_11020 10.0kb downstream 10.0kb downstream 12257 true Chr11: 7110562-7122818 Physcomitrium patens
Pp3c11_11020 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7112819-7122818 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350094 5274 Embryophyte View MSA
123426834 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.726        
cufflinks 0.536       Low
cufflinks 0.59        
cufflinks 1.123        
cufflinks 1.485        
cufflinks 1.29        
cufflinks 1.313        
cufflinks 2.191       High
cufflinks 0.426       Low
cufflinks 1.352        
cufflinks 1.596        
cufflinks 0.858        
cufflinks 1.296        
cufflinks 3.355       High
cufflinks 1.259        
cufflinks 0.979        
cufflinks 0.811        
cufflinks 0.186       Low
cufflinks 0.525       Low
cufflinks 0.467       Low
cufflinks 1.246        
cufflinks 1.309        
cufflinks 0.697        
cufflinks 1.268        
cufflinks 0.955        
cufflinks 2.705       High
cufflinks 2.05       High
cufflinks 1.357        
cufflinks 0.944        
cufflinks 1.933       High

0 Strain