Gene : Pp3c12_15210 P. patens v3.3
Defline:  (1 of 131) 3.6.4.13 - RNA helicase Genomic Order:  696
Name:  ? Pp3c12_15210 Secondary Identifier:  ? PAC:32974242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_15210 0.5kb upstream 0.5kb upstream 2281 true Chr12: 10188936-10191216 Physcomitrium patens
Pp3c12_15210 0.5kb upstream 0.5kb upstream 500 false Chr12: 10190717-10191216 Physcomitrium patens
Pp3c12_15210 0.5kb downstream 0.5kb downstream 2281 true Chr12: 10188436-10190716 Physcomitrium patens
Pp3c12_15210 0.5kb downstream 0.5kb downstream 500 false Chr12: 10188436-10188935 Physcomitrium patens
Pp3c12_15210 1.0kb upstream 1.0kb upstream 2781 true Chr12: 10188936-10191716 Physcomitrium patens
Pp3c12_15210 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10190717-10191716 Physcomitrium patens
Pp3c12_15210 1.0kb downstream 1.0kb downstream 2781 true Chr12: 10187936-10190716 Physcomitrium patens
Pp3c12_15210 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10187936-10188935 Physcomitrium patens
Pp3c12_15210 2.0kb upstream 2.0kb upstream 3781 true Chr12: 10188936-10192716 Physcomitrium patens
Pp3c12_15210 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10190717-10192716 Physcomitrium patens
Pp3c12_15210 2.0kb downstream 2.0kb downstream 3781 true Chr12: 10186936-10190716 Physcomitrium patens
Pp3c12_15210 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10186936-10188935 Physcomitrium patens
Pp3c12_15210 5.0kb upstream 5.0kb upstream 6781 true Chr12: 10188936-10195716 Physcomitrium patens
Pp3c12_15210 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10190717-10195716 Physcomitrium patens
Pp3c12_15210 5.0kb downstream 5.0kb downstream 6781 true Chr12: 10183936-10190716 Physcomitrium patens
Pp3c12_15210 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10183936-10188935 Physcomitrium patens
Pp3c12_15210 10.0kb upstream 10.0kb upstream 11781 true Chr12: 10188936-10200716 Physcomitrium patens
Pp3c12_15210 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10190717-10200716 Physcomitrium patens
Pp3c12_15210 10.0kb downstream 10.0kb downstream 11781 true Chr12: 10178936-10190716 Physcomitrium patens
Pp3c12_15210 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10178936-10188935 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121334634 5274 Embryophyte Singleton cluster - no MSA
123371505 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain