Gene : Pp3c12_2410 P. patens v3.3
Defline:  (1 of 1) KOG0919 - C-5 cytosine-specific DNA methylase Genomic Order:  71
Name:  ? Pp3c12_2410 Secondary Identifier:  ? PAC:32972342
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_2410 0.5kb upstream 0.5kb upstream 4572 true Chr12: 1995537-2000108 Physcomitrium patens
Pp3c12_2410 0.5kb upstream 0.5kb upstream 500 false Chr12: 1999609-2000108 Physcomitrium patens
Pp3c12_2410 0.5kb downstream 0.5kb downstream 4572 true Chr12: 1995037-1999608 Physcomitrium patens
Pp3c12_2410 0.5kb downstream 0.5kb downstream 500 false Chr12: 1995037-1995536 Physcomitrium patens
Pp3c12_2410 1.0kb upstream 1.0kb upstream 5072 true Chr12: 1995537-2000608 Physcomitrium patens
Pp3c12_2410 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1999609-2000608 Physcomitrium patens
Pp3c12_2410 1.0kb downstream 1.0kb downstream 5072 true Chr12: 1994537-1999608 Physcomitrium patens
Pp3c12_2410 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1994537-1995536 Physcomitrium patens
Pp3c12_2410 2.0kb upstream 2.0kb upstream 6072 true Chr12: 1995537-2001608 Physcomitrium patens
Pp3c12_2410 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1999609-2001608 Physcomitrium patens
Pp3c12_2410 2.0kb downstream 2.0kb downstream 6072 true Chr12: 1993537-1999608 Physcomitrium patens
Pp3c12_2410 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1993537-1995536 Physcomitrium patens
Pp3c12_2410 5.0kb upstream 5.0kb upstream 9072 true Chr12: 1995537-2004608 Physcomitrium patens
Pp3c12_2410 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1999609-2004608 Physcomitrium patens
Pp3c12_2410 5.0kb downstream 5.0kb downstream 9072 true Chr12: 1990537-1999608 Physcomitrium patens
Pp3c12_2410 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1990537-1995536 Physcomitrium patens
Pp3c12_2410 10.0kb upstream 10.0kb upstream 14072 true Chr12: 1995537-2009608 Physcomitrium patens
Pp3c12_2410 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1999609-2009608 Physcomitrium patens
Pp3c12_2410 10.0kb downstream 10.0kb downstream 14072 true Chr12: 1985537-1999608 Physcomitrium patens
Pp3c12_2410 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1985537-1995536 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279        
cufflinks 0.286        
cufflinks 0.308        
cufflinks 0.16       Low
cufflinks 0.22        
cufflinks 0.134       Low
cufflinks 0.17        
cufflinks 0.33        
cufflinks 0.344        
cufflinks 0.307        
cufflinks 0.307        
cufflinks 0.485       High
cufflinks 0.155       Low
cufflinks 0.279        
cufflinks 0.163        
cufflinks 0.198        
cufflinks 0.57       High
cufflinks 0.243        
cufflinks 0.23        
cufflinks 0.243        
cufflinks 0.34        
cufflinks 0.233        
cufflinks 0.496       High
cufflinks 0.263        
cufflinks 0.25        
cufflinks 0.131       Low
cufflinks 0.223        
cufflinks 0.285        
cufflinks 0.132       Low
cufflinks 0.119       Low

0 Strain