Gene : Pp3c12_9510 P. patens v3.3
Defline:  (1 of 2) PF10693 - Protein of unknown function (DUF2499) (DUF2499) Genomic Order:  406
Name:  ? Pp3c12_9510 Secondary Identifier:  ? PAC:32972435
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_9510 0.5kb upstream 0.5kb upstream 3715 true Chr12: 6563537-6567251 Physcomitrium patens
Pp3c12_9510 0.5kb upstream 0.5kb upstream 500 false Chr12: 6566752-6567251 Physcomitrium patens
Pp3c12_9510 0.5kb downstream 0.5kb downstream 3715 true Chr12: 6563037-6566751 Physcomitrium patens
Pp3c12_9510 0.5kb downstream 0.5kb downstream 500 false Chr12: 6563037-6563536 Physcomitrium patens
Pp3c12_9510 1.0kb upstream 1.0kb upstream 4215 true Chr12: 6563537-6567751 Physcomitrium patens
Pp3c12_9510 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6566752-6567751 Physcomitrium patens
Pp3c12_9510 1.0kb downstream 1.0kb downstream 4215 true Chr12: 6562537-6566751 Physcomitrium patens
Pp3c12_9510 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6562537-6563536 Physcomitrium patens
Pp3c12_9510 2.0kb upstream 2.0kb upstream 5215 true Chr12: 6563537-6568751 Physcomitrium patens
Pp3c12_9510 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6566752-6568751 Physcomitrium patens
Pp3c12_9510 2.0kb downstream 2.0kb downstream 5215 true Chr12: 6561537-6566751 Physcomitrium patens
Pp3c12_9510 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6561537-6563536 Physcomitrium patens
Pp3c12_9510 5.0kb upstream 5.0kb upstream 8215 true Chr12: 6563537-6571751 Physcomitrium patens
Pp3c12_9510 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6566752-6571751 Physcomitrium patens
Pp3c12_9510 5.0kb downstream 5.0kb downstream 8215 true Chr12: 6558537-6566751 Physcomitrium patens
Pp3c12_9510 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6558537-6563536 Physcomitrium patens
Pp3c12_9510 10.0kb upstream 10.0kb upstream 13215 true Chr12: 6563537-6576751 Physcomitrium patens
Pp3c12_9510 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6566752-6576751 Physcomitrium patens
Pp3c12_9510 10.0kb downstream 10.0kb downstream 13215 true Chr12: 6553537-6566751 Physcomitrium patens
Pp3c12_9510 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6553537-6563536 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348068 5274 Embryophyte View MSA
123427826 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 338.388     High  
cufflinks 289.371     High  
cufflinks 242.609     High  
cufflinks 245.373     High  
cufflinks 380.888     High  
cufflinks 9.987       Low
cufflinks 170.794     High  
cufflinks 422.328     High  
cufflinks 572.093     High High
cufflinks 11.539       Low
cufflinks 214.154     High  
cufflinks 254.545     High  
cufflinks 81.03     High  
cufflinks 225.552     High  
cufflinks 156.468     High  
cufflinks 183.059     High  
cufflinks 118.146     High  
cufflinks 486.82     High High
cufflinks 463.885     High High
cufflinks 174.04     High  
cufflinks 214.231     High  
cufflinks 354.001     High  
cufflinks 253.386     High  
cufflinks 83.214     High  
cufflinks 145.07     High  
cufflinks 338.207     High  
cufflinks 250.559     High  
cufflinks 129.401     High  
cufflinks 71.319     High Low
cufflinks 229.168     High  

0 Strain