Gene : Pp3c12_7910 P. patens v3.3
Defline:  (1 of 7) PF04827 - Plant transposon protein (Plant_tran) Genomic Order:  318
Name:  ? Pp3c12_7910 Secondary Identifier:  ? PAC:32973646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_7910 0.5kb upstream 0.5kb upstream 1277 true Chr12: 5537133-5538409 Physcomitrium patens
Pp3c12_7910 0.5kb upstream 0.5kb upstream 500 false Chr12: 5537910-5538409 Physcomitrium patens
Pp3c12_7910 0.5kb downstream 0.5kb downstream 1277 true Chr12: 5536633-5537909 Physcomitrium patens
Pp3c12_7910 0.5kb downstream 0.5kb downstream 500 false Chr12: 5536633-5537132 Physcomitrium patens
Pp3c12_7910 1.0kb upstream 1.0kb upstream 1777 true Chr12: 5537133-5538909 Physcomitrium patens
Pp3c12_7910 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5537910-5538909 Physcomitrium patens
Pp3c12_7910 1.0kb downstream 1.0kb downstream 1777 true Chr12: 5536133-5537909 Physcomitrium patens
Pp3c12_7910 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5536133-5537132 Physcomitrium patens
Pp3c12_7910 2.0kb upstream 2.0kb upstream 2777 true Chr12: 5537133-5539909 Physcomitrium patens
Pp3c12_7910 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5537910-5539909 Physcomitrium patens
Pp3c12_7910 2.0kb downstream 2.0kb downstream 2777 true Chr12: 5535133-5537909 Physcomitrium patens
Pp3c12_7910 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5535133-5537132 Physcomitrium patens
Pp3c12_7910 5.0kb upstream 5.0kb upstream 5777 true Chr12: 5537133-5542909 Physcomitrium patens
Pp3c12_7910 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5537910-5542909 Physcomitrium patens
Pp3c12_7910 5.0kb downstream 5.0kb downstream 5777 true Chr12: 5532133-5537909 Physcomitrium patens
Pp3c12_7910 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5532133-5537132 Physcomitrium patens
Pp3c12_7910 10.0kb upstream 10.0kb upstream 10777 true Chr12: 5537133-5547909 Physcomitrium patens
Pp3c12_7910 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5537910-5547909 Physcomitrium patens
Pp3c12_7910 10.0kb downstream 10.0kb downstream 10777 true Chr12: 5527133-5537909 Physcomitrium patens
Pp3c12_7910 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5527133-5537132 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351718 5274 Embryophyte View MSA
123382288 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain