Gene : Mapoly0001s0538 M. polymorpha v3.1
Defline:  (1 of 1) K11976 - E3 ubiquitin-protein ligase RNF216 [EC:6.3.2.19] (RNF216; TRIAD3) Genomic Order:  538
Name:  ? Mapoly0001s0538 Secondary Identifier:  ? PAC:33020374
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mpolymorpha PWY-7511 Marchantia polymorpha pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Mapoly0001s0538 0.5kb upstream 0.5kb upstream 4933 true scaffold_1: 5716947-5721879 Marchantia polymorpha
Mapoly0001s0538 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5721380-5721879 Marchantia polymorpha
Mapoly0001s0538 0.5kb downstream 0.5kb downstream 4933 true scaffold_1: 5716447-5721379 Marchantia polymorpha
Mapoly0001s0538 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5716447-5716946 Marchantia polymorpha
Mapoly0001s0538 1.0kb upstream 1.0kb upstream 5433 true scaffold_1: 5716947-5722379 Marchantia polymorpha
Mapoly0001s0538 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5721380-5722379 Marchantia polymorpha
Mapoly0001s0538 1.0kb downstream 1.0kb downstream 5433 true scaffold_1: 5715947-5721379 Marchantia polymorpha
Mapoly0001s0538 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5715947-5716946 Marchantia polymorpha
Mapoly0001s0538 2.0kb upstream 2.0kb upstream 6433 true scaffold_1: 5716947-5723379 Marchantia polymorpha
Mapoly0001s0538 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5721380-5723379 Marchantia polymorpha
Mapoly0001s0538 2.0kb downstream 2.0kb downstream 6433 true scaffold_1: 5714947-5721379 Marchantia polymorpha
Mapoly0001s0538 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5714947-5716946 Marchantia polymorpha
Mapoly0001s0538 5.0kb upstream 5.0kb upstream 9433 true scaffold_1: 5716947-5726379 Marchantia polymorpha
Mapoly0001s0538 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5721380-5726379 Marchantia polymorpha
Mapoly0001s0538 5.0kb downstream 5.0kb downstream 9433 true scaffold_1: 5711947-5721379 Marchantia polymorpha
Mapoly0001s0538 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5711947-5716946 Marchantia polymorpha
Mapoly0001s0538 10.0kb upstream 10.0kb upstream 14433 true scaffold_1: 5716947-5731379 Marchantia polymorpha
Mapoly0001s0538 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5721380-5731379 Marchantia polymorpha
Mapoly0001s0538 10.0kb downstream 10.0kb downstream 14433 true scaffold_1: 5706947-5721379 Marchantia polymorpha
Mapoly0001s0538 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5706947-5716946 Marchantia polymorpha

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343393 5274 Embryophyte View MSA
123379643 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain