Gene : Mapoly0001s0297 M. polymorpha v3.1
Defline:  (1 of 1) 1.3.99.30 - Phytoene desaturase (3,4-didehydrolycopene-forming) / 5-step phytoene desaturase Genomic Order:  297
Name:  ? Mapoly0001s0297 Secondary Identifier:  ? PAC:33020192
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mpolymorpha PWY-6287 Marchantia polymorpha pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Mapoly0001s0297 0.5kb upstream 0.5kb upstream 6999 true scaffold_1: 3216174-3223172 Marchantia polymorpha
Mapoly0001s0297 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3216174-3216673 Marchantia polymorpha
Mapoly0001s0297 0.5kb downstream 0.5kb downstream 6999 true scaffold_1: 3216674-3223672 Marchantia polymorpha
Mapoly0001s0297 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3223173-3223672 Marchantia polymorpha
Mapoly0001s0297 1.0kb upstream 1.0kb upstream 7499 true scaffold_1: 3215674-3223172 Marchantia polymorpha
Mapoly0001s0297 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3215674-3216673 Marchantia polymorpha
Mapoly0001s0297 1.0kb downstream 1.0kb downstream 7499 true scaffold_1: 3216674-3224172 Marchantia polymorpha
Mapoly0001s0297 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3223173-3224172 Marchantia polymorpha
Mapoly0001s0297 2.0kb upstream 2.0kb upstream 8499 true scaffold_1: 3214674-3223172 Marchantia polymorpha
Mapoly0001s0297 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3214674-3216673 Marchantia polymorpha
Mapoly0001s0297 2.0kb downstream 2.0kb downstream 8499 true scaffold_1: 3216674-3225172 Marchantia polymorpha
Mapoly0001s0297 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3223173-3225172 Marchantia polymorpha
Mapoly0001s0297 5.0kb upstream 5.0kb upstream 11499 true scaffold_1: 3211674-3223172 Marchantia polymorpha
Mapoly0001s0297 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3211674-3216673 Marchantia polymorpha
Mapoly0001s0297 5.0kb downstream 5.0kb downstream 11499 true scaffold_1: 3216674-3228172 Marchantia polymorpha
Mapoly0001s0297 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3223173-3228172 Marchantia polymorpha
Mapoly0001s0297 10.0kb upstream 10.0kb upstream 16499 true scaffold_1: 3206674-3223172 Marchantia polymorpha
Mapoly0001s0297 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3206674-3216673 Marchantia polymorpha
Mapoly0001s0297 10.0kb downstream 10.0kb downstream 16499 true scaffold_1: 3216674-3233172 Marchantia polymorpha
Mapoly0001s0297 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3223173-3233172 Marchantia polymorpha

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121359648 5274 Embryophyte Singleton cluster - no MSA
123389871 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain