Gene : Aco021892 A. comosus v3

Defline:  (1 of 1) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  336
Name:  ? Aco021892 Secondary Identifier:  ? PAC:33032610

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acomosus PHOTOALL-PWY Ananas comosus pathologic  
Acomosus PWY-101 Ananas comosus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aco021892 0.5kb upstream 0.5kb upstream 2931 true LG21: 5427940-5430870 Ananas comosus
Aco021892 0.5kb upstream 0.5kb upstream 500 false LG21: 5430371-5430870 Ananas comosus
Aco021892 0.5kb downstream 0.5kb downstream 2931 true LG21: 5427440-5430370 Ananas comosus
Aco021892 0.5kb downstream 0.5kb downstream 500 false LG21: 5427440-5427939 Ananas comosus
Aco021892 1.0kb upstream 1.0kb upstream 3431 true LG21: 5427940-5431370 Ananas comosus
Aco021892 1.0kb upstream 1.0kb upstream 1000 false LG21: 5430371-5431370 Ananas comosus
Aco021892 1.0kb downstream 1.0kb downstream 3431 true LG21: 5426940-5430370 Ananas comosus
Aco021892 1.0kb downstream 1.0kb downstream 1000 false LG21: 5426940-5427939 Ananas comosus
Aco021892 2.0kb upstream 2.0kb upstream 4431 true LG21: 5427940-5432370 Ananas comosus
Aco021892 2.0kb upstream 2.0kb upstream 2000 false LG21: 5430371-5432370 Ananas comosus
Aco021892 2.0kb downstream 2.0kb downstream 4431 true LG21: 5425940-5430370 Ananas comosus
Aco021892 2.0kb downstream 2.0kb downstream 2000 false LG21: 5425940-5427939 Ananas comosus
Aco021892 5.0kb upstream 5.0kb upstream 7431 true LG21: 5427940-5435370 Ananas comosus
Aco021892 5.0kb upstream 5.0kb upstream 5000 false LG21: 5430371-5435370 Ananas comosus
Aco021892 5.0kb downstream 5.0kb downstream 7431 true LG21: 5422940-5430370 Ananas comosus
Aco021892 5.0kb downstream 5.0kb downstream 5000 false LG21: 5422940-5427939 Ananas comosus
Aco021892 10.0kb upstream 10.0kb upstream 12431 true LG21: 5427940-5440370 Ananas comosus
Aco021892 10.0kb upstream 10.0kb upstream 10000 false LG21: 5430371-5440370 Ananas comosus
Aco021892 10.0kb downstream 10.0kb downstream 12431 true LG21: 5417940-5430370 Ananas comosus
Aco021892 10.0kb downstream 10.0kb downstream 10000 false LG21: 5417940-5427939 Ananas comosus

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121998367 5273 Angiosperm Singleton cluster - no MSA
121268509 5274 Embryophyte Singleton cluster - no MSA
123306836 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain