Gene : Aco025939 A. comosus v3
Defline:  (1 of 2) K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) Genomic Order:  4
Name:  ? Aco025939 Secondary Identifier:  ? PAC:33030729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aco025939 0.5kb upstream 0.5kb upstream 1986 true scaffold_1199: 7210-9195 Ananas comosus
Aco025939 0.5kb upstream 0.5kb upstream 500 false scaffold_1199: 8696-9195 Ananas comosus
Aco025939 0.5kb downstream 0.5kb downstream 1986 true scaffold_1199: 6710-8695 Ananas comosus
Aco025939 0.5kb downstream 0.5kb downstream 500 false scaffold_1199: 6710-7209 Ananas comosus
Aco025939 1.0kb upstream 1.0kb upstream 2486 true scaffold_1199: 7210-9695 Ananas comosus
Aco025939 1.0kb upstream 1.0kb upstream 1000 false scaffold_1199: 8696-9695 Ananas comosus
Aco025939 1.0kb downstream 1.0kb downstream 2486 true scaffold_1199: 6210-8695 Ananas comosus
Aco025939 1.0kb downstream 1.0kb downstream 1000 false scaffold_1199: 6210-7209 Ananas comosus
Aco025939 2.0kb upstream 2.0kb upstream 3486 true scaffold_1199: 7210-10695 Ananas comosus
Aco025939 2.0kb upstream 2.0kb upstream 2000 false scaffold_1199: 8696-10695 Ananas comosus
Aco025939 2.0kb downstream 2.0kb downstream 3486 true scaffold_1199: 5210-8695 Ananas comosus
Aco025939 2.0kb downstream 2.0kb downstream 2000 false scaffold_1199: 5210-7209 Ananas comosus
Aco025939 5.0kb upstream 5.0kb upstream 6486 true scaffold_1199: 7210-13695 Ananas comosus
Aco025939 5.0kb upstream 5.0kb upstream 5000 false scaffold_1199: 8696-13695 Ananas comosus
Aco025939 5.0kb downstream 5.0kb downstream 6486 true scaffold_1199: 2210-8695 Ananas comosus
Aco025939 5.0kb downstream 5.0kb downstream 5000 false scaffold_1199: 2210-7209 Ananas comosus
Aco025939 10.0kb upstream 10.0kb upstream 11486 true scaffold_1199: 7210-18695 Ananas comosus
Aco025939 10.0kb upstream 10.0kb upstream 10000 false scaffold_1199: 8696-18695 Ananas comosus
Aco025939 10.0kb downstream 10.0kb downstream 8695 true scaffold_1199: 1-8695 Ananas comosus
Aco025939 10.0kb downstream 10.0kb downstream 7209 false scaffold_1199: 1-7209 Ananas comosus

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121997780 5273 Angiosperm Singleton cluster - no MSA
121267922 5274 Embryophyte Singleton cluster - no MSA
123306249 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain