Protein Domain : IPR002885

Type:  Repeat Name:  Pentatricopeptide repeat
Description:  This entry represents the PPR repeat.Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins.Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see ) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ].Examples of PPR repeat-containing proteins include PET309 , which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein that has a domain organisation similar to the human BRCA1 protein. Short Name:  Pentatricopeptide_repeat

0 Child Features

0 Contains

6 Cross Referencess

Identifier
PF01535
PF12854
PF13041
PF13812
PS51375
TIGR00756

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

202003 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
134581 D8T8Y5 PAC:15412112 Selaginella moellendorffii 771  
72206 D8T8T0 PAC:15402345 Selaginella moellendorffii 106  
430370 D8T973 PAC:15419368 Selaginella moellendorffii 428  
134788 D8T990 PAC:15413706 Selaginella moellendorffii 464  
134756 D8T953 PAC:15413618 Selaginella moellendorffii 147  
16806 D8RF93 PAC:15420141 Selaginella moellendorffii 171  
171135 D8RFY1 PAC:15406565 Selaginella moellendorffii 829  
18228 D8RFC0 PAC:15421337 Selaginella moellendorffii 83  
410602 D8RF94 PAC:15407011 Selaginella moellendorffii 538  
410940 D8RGC8 PAC:15409508 Selaginella moellendorffii 177  
440917 D8RFE1 PAC:15408661 Selaginella moellendorffii 496  
62156 D8RFF1 PAC:15416895 Selaginella moellendorffii 321  
92207 D8RFB3 PAC:15416794 Selaginella moellendorffii 457  
92231 D8RF90 PAC:15416878 Selaginella moellendorffii 789  
92172 D8RFN1 PAC:15416204 Selaginella moellendorffii 554  
72740 D8RFF0 PAC:15406269 Selaginella moellendorffii 107  
92471 D8RF86 PAC:15418474 Selaginella moellendorffii 689  
92456 D8RFN6 PAC:15418435 Selaginella moellendorffii 383  
92426 D8RFJ2 PAC:15418386 Selaginella moellendorffii 265  
92492 D8RFC6 PAC:15418518 Selaginella moellendorffii 331  
92328 D8RG95 PAC:15417628 Selaginella moellendorffii 431  
92610 D8RFU1 PAC:15419865 Selaginella moellendorffii 257  
92605 D8RFB6 PAC:15419844 Selaginella moellendorffii 155  
92565 D8RFH2 PAC:15419224 Selaginella moellendorffii 307  
92825 D8RFD6 PAC:15421313 Selaginella moellendorffii 169  
92851 D8RG32 PAC:15421367 Selaginella moellendorffii 87  
93022 D8RFY8 PAC:15418243 Selaginella moellendorffii 284  
134893 D8T9F2 PAC:15414523 Selaginella moellendorffii 167  
135030 D8T9L3 PAC:15411164 Selaginella moellendorffii 548  
135000 D8T9J3 PAC:15411105 Selaginella moellendorffii 545  

9 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8039510
            7664742
            15270678
            15269332
            10664580
            12782738
            12832482
            18031283
            17560114