Protein Domain : IPR029066

Type:  Domain Name:  PLP-binding barrel
Description:  This entry represents the PLP (pyridoxal 5'-phosphate)-binding barrel that can be found at the N terminus of alanine racemase-like proteins and some uncharacterised proteins.The molecular structure of alanine racemase from Bacillus stearothermophiluswas determined by X-ray crystallography to a resolution of 1.9 A []. The alanine racemase monomer is composed of two domains, an eight-stranded alpha/beta barrel at the N terminus, and a C-terminal domain essentially composed of beta-strands. The pyridoxal 5'-phosphate (PLP) cofactor lies in and above the mouth of the alpha/beta barrel and is covalently linked via an aldimine linkage to a lysine residue, which is at the C terminus of the first beta-strand of the alpha/beta barrel. Short Name:  PLP-binding_barrel

2 Child Features

DB identifier Type Name
IPR001608 Domain Alanine racemase, N-terminal
IPR022644 Domain Orn/DAP/Arg decarboxylase 2, N-terminal

0 Contains

2 Cross Referencess

Identifier
G3DSA:3.20.20.10
SSF51419

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
232921 D8S1M4 PAC:15423350 Selaginella moellendorffii 390  
83798 D8R191 PAC:15416495 Selaginella moellendorffii 244  
407502 D8R5T8 PAC:15419626 Selaginella moellendorffii 289  
139552 D8QQK9 PAC:15404224 Selaginella moellendorffii 627  
182543 D8STL6 PAC:15419829 Selaginella moellendorffii 501  
70229 D8QPL9 PAC:15418962 Selaginella moellendorffii 613  
evm.model.supercontig_106.11 PAC:16405162 Carica papaya 238  
evm.model.supercontig_106.13 PAC:16405175 Carica papaya 309  
evm.model.supercontig_12.270 PAC:16406826 Carica papaya 247  
evm.model.supercontig_150.13 PAC:16409465 Carica papaya 738  
evm.model.supercontig_152.43 PAC:16409628 Carica papaya 244  
29762.m000484 B9STY6 PAC:16808132 Ricinus communis 245  
29842.m003548 B9RXG8 PAC:16810681 Ricinus communis 270  
30098.m001714 B9RPI3 PAC:16817609 Ricinus communis 264  
30131.m007074 B9RH82 PAC:16818899 Ricinus communis 488  
30131.m007139 B9RG52 PAC:16818962 Ricinus communis 724  
30170.m014298 B9R8G7 PAC:16822131 Ricinus communis 416  
30170.m014299 B9R8G8 PAC:16822132 Ricinus communis 416  
29595.m000288 B9SY67 PAC:16803376 Ricinus communis 85  
29527.m000056 B9TAT1 PAC:16802996 Ricinus communis 238  
Cucsa.394080.1 PAC:16983130 Cucumis sativus 349  
Cucsa.042650.1 PAC:16952957 Cucumis sativus 245  
Cucsa.045000.1 A0A0A0KJU8 PAC:16953296 Cucumis sativus 246  
Cucsa.109450.1 A0A0A0LM06 PAC:16959860 Cucumis sativus 482  
Cucsa.109090.1 A0A0A0LPF5 PAC:16959795 Cucumis sativus 717  
orange1.1g005135m A0A067DF39 PAC:18122161 Citrus sinensis 712  
orange1.1g004438m A0A067DER6 PAC:18122160 Citrus sinensis 753  
orange1.1g024293m A0A067GFC6 PAC:18112446 Citrus sinensis 269  
orange1.1g025380m A0A067GI32 PAC:18112447 Citrus sinensis 253  
orange1.1g029918m A0A067GSA9 PAC:18112448 Citrus sinensis 185  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9063881