Protein Domain : IPR021715

Type:  Domain Name:  Pre-mRNA splicing Prp18-interacting factor
Description:  The spliceosome, an assembly of snRNAs (U1, U2, U4/U6, and U5) and proteins, catalyses the excision of introns from pre-mRNAs in two successive trans-esterification reactions. Step 2 depends upon integral spliceosome constituents such as U5 snRNA and Prp8 and non-spliceosomal proteins Prp16, Slu7, Prp18, and Prp22. ATP hydrolysis by the DEAH-box enzyme Prp16 promotes a conformational change in the spliceosome that leads to protection of the 3'ss from targeted RNase H cleavage. This change, which probably reflects binding of the 3'ss PyAG in the catalytic centre of the spliceosome, requires the ordered recruitment of Slu7, Prp18, and Prp22 to the spliceosome. There is a close functional relationship between Prp8, Prp18, and Slu7, and Prp18 interacts with Slu7, so that together they recruit Prp22 to the spliceosome. Most members of the family carry a zinc-finger of the CCHC-type upstream of this domain. Short Name:  Slu7

0 Child Features

0 Contains

1 Cross References

Identifier
PF11708

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

647 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
231984 D8RNQ6 PAC:15420664 Selaginella moellendorffii 500  
164109 D8QMP1 PAC:15408020 Selaginella moellendorffii 539  
evm.model.supercontig_44.58 PAC:16420198 Carica papaya 536  
30005.m001297 B9SF44 PAC:16815529 Ricinus communis 536  
Cucsa.091790.1 A0A0A0LFN9 PAC:16957527 Cucumis sativus 536  
Cucsa.255400.1 A0A0A0L9U2 PAC:16972389 Cucumis sativus 540  
orange1.1g013091m A0A067EZG6 PAC:18113795 Citrus sinensis 449  
orange1.1g013098m A0A067EZC5 PAC:18113796 Citrus sinensis 449  
orange1.1g040625m PAC:18120575 Citrus sinensis 395  
orange1.1g032225m A0A067DUG7 PAC:18124046 Citrus sinensis 145  
AT4G37120.1 O23174 PAC:19644878 Arabidopsis thaliana 536  
AT3G45950.1 Q9LZT6 PAC:19664980 Arabidopsis thaliana 385  
AT1G65660.1 Q9SHY8 PAC:19653385 Arabidopsis thaliana 535  
Thhalv10024881m V4MHZ2 PAC:20194212 Eutrema salsugineum 535  
Thhalv10027112m V4LZS5 PAC:20194416 Eutrema salsugineum 462  
Thhalv10022337m PAC:20183171 Eutrema salsugineum 463  
Thhalv10007322m V4KYV2 PAC:20188575 Eutrema salsugineum 535  
Ciclev10019645m V4TUA7 PAC:20810569 Citrus clementina 537  
Ciclev10009749m V4WIN7 PAC:20796077 Citrus clementina 161  
Ciclev10004803m V4S3V3 PAC:20792237 Citrus clementina 503  
Lus10007480 PAC:23176476 Linum usitatissimum 98  
Lus10030817 PAC:23155421 Linum usitatissimum 1679  
Lus10024887 PAC:23178969 Linum usitatissimum 537  
Lus10028956 PAC:23177324 Linum usitatissimum 535  
Lus10022931 PAC:23160005 Linum usitatissimum 537  
Potri.015G048200.3 PAC:27018677 Populus trichocarpa 520  
Potri.015G048200.1 B9IE19 PAC:27018676 Populus trichocarpa 536  
Potri.015G048200.2 PAC:27018678 Populus trichocarpa 468  
Potri.015G048200.4 B9IE19 PAC:27018675 Populus trichocarpa 536  
Potri.012G064100.5 PAC:27051249 Populus trichocarpa 396  

0 Publications