Protein Domain : IPR008998

Type:  Domain Name:  Agglutinin domain
Description:  Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types. Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus(amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity []. Short Name:  Agglutinin

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF07468
SM00791
SSF50382

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

904 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
415000 D8RUA2 PAC:15417153 Selaginella moellendorffii 186  
424555 D8SQA4 PAC:15402962 Selaginella moellendorffii 477  
402373 D8QQF3 PAC:15403525 Selaginella moellendorffii 551  
269784 D8T6T3 PAC:15419473 Selaginella moellendorffii 441  
447143 D8SX47 PAC:15422997 Selaginella moellendorffii 488  
403095 D8QP12 PAC:15404210 Selaginella moellendorffii 560  
409476 D8RBK3 PAC:15402496 Selaginella moellendorffii 496  
437708 D8QP10 PAC:15420449 Selaginella moellendorffii 426  
410027 D8RD86 PAC:15402522 Selaginella moellendorffii 375  
evm.TU.contig_29394.3 PAC:16429698 Carica papaya 38  
evm.TU.contig_30822.2 PAC:16429891 Carica papaya 202  
evm.TU.contig_34789.1 PAC:16430509 Carica papaya 306  
evm.TU.contig_44888.1 PAC:16432103 Carica papaya 258  
evm.model.supercontig_125.1 PAC:16407237 Carica papaya 233  
evm.model.supercontig_125.2 PAC:16407248 Carica papaya 168  
evm.model.supercontig_1831.1 PAC:16411625 Carica papaya 465  
evm.model.supercontig_223.19 PAC:16414019 Carica papaya 421  
evm.model.supercontig_264.7 PAC:16415424 Carica papaya 465  
evm.model.supercontig_264.8 PAC:16415425 Carica papaya 465  
evm.model.supercontig_291.2 PAC:16416317 Carica papaya 471  
evm.model.supercontig_291.3 PAC:16416318 Carica papaya 96  
evm.model.supercontig_567.1 PAC:16422823 Carica papaya 468  
evm.model.supercontig_567.2 PAC:16422824 Carica papaya 122  
evm.model.supercontig_83.17 PAC:16427153 Carica papaya 467  
evm.model.supercontig_83.16 PAC:16427152 Carica papaya 178  
evm.model.supercontig_83.19 PAC:16427155 Carica papaya 197  
evm.model.supercontig_83.14 PAC:16427150 Carica papaya 468  
29737.m001246 B9SC09 PAC:16807264 Ricinus communis 472  
30078.m002350 B9S0N3 PAC:16817461 Ricinus communis 466  
30078.m002351 B9S0N4 PAC:16817462 Ricinus communis 476  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2777780
            9334739
            2271665
            15229195