Protein Domain : IPR012674

Type:  Domain Name:  Calycin
Description:  Calycins form a large protein superfamily that share similar beta-barrel structures. Calycins can be divided into families that include lipocalins, fatty acid binding proteins, triabin, and thrombin inhibitor []. Of these families, the lipocalin family () is the largest and functionally the most diverse. Lipocalins are extracellular proteins that share several common recognition properties such as ligand binding, receptor binding and the formation of complexes with other macromolecules. Lipocalins include the retinol binding protein, lipocalin allergen, aphrodisin (a sex hormone), alpha-2U-globulin, prostaglandin D synthase, beta-lactoglobulin, bilin-binding protein, and the nitrophorins [, , , ]. Bacterial hypothetical proteins YodA from Escherichia coli and YwiB from Bacillus subtilis share a similar calycin beta-barrel structure. Part of the YodA hypothetical protein has a calycin-like structure []. Short Name:  Calycin

4 Child Features

DB identifier Type Name
IPR010788 Domain VDE lipocalin domain
IPR000566 Domain Lipocalin/cytosolic fatty-acid binding domain
IPR002351 Domain Nitrophorin domain
IPR015304 Domain ZinT domain

1 Contains

DB identifier Type Name
IPR022272 Conserved_site Lipocalin family conserved site

1 Cross References

Identifier
G3DSA:2.40.128.20

6 Found Ins

DB identifier Type Name
IPR022271 Family Lipocalin, ApoD type
IPR002345 Family Lipocalin
IPR002968 Family Alpha-1-microglobulin
IPR002969 Family Apolipoprotein D
IPR003057 Family Invertebrate colouration protein
IPR005657 Family Triabin/Procalin

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR011038 Domain Calycin-like

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
98590 D8RNU7 PAC:15414626 Selaginella moellendorffii 258  
174150 D8RTL7 PAC:15415517 Selaginella moellendorffii 514  
81134 D8QZF6 PAC:15405921 Selaginella moellendorffii 316  
155397 D8SHJ4 PAC:15405541 Selaginella moellendorffii 199  
445437 D8SIN8 PAC:15419549 Selaginella moellendorffii 1046  
156974 D8SNP0 PAC:15413135 Selaginella moellendorffii 209  
85565 D8R677 PAC:15420787 Selaginella moellendorffii 377  
125344 D8SUQ2 PAC:15406155 Selaginella moellendorffii 214  
402947 D8QNJ6 PAC:15408048 Selaginella moellendorffii 476  
408493 D8R8H4 PAC:15421904 Selaginella moellendorffii 534  
126771 D8SX11 PAC:15412284 Selaginella moellendorffii 213  
evm.model.supercontig_107.61 PAC:16405367 Carica papaya 182  
evm.model.supercontig_146.44 PAC:16409134 Carica papaya 265  
evm.model.supercontig_209.38 PAC:16413354 Carica papaya 502  
evm.model.supercontig_22.25 PAC:16413862 Carica papaya 358  
evm.model.supercontig_43.125 PAC:16419935 Carica papaya 185  
evm.model.supercontig_51.78 PAC:16421897 Carica papaya 479  
evm.model.supercontig_97.37 PAC:16429072 Carica papaya 332  
evm.model.supercontig_98.33 PAC:16429191 Carica papaya 360  
29709.m001168 B9SKK3 PAC:16806386 Ricinus communis 484  
29737.m001222 B9SBY6 PAC:16807241 Ricinus communis 187  
30066.m000744 B9SM02 PAC:16816510 Ricinus communis 262  
30147.m014413 B9RA70 PAC:16820424 Ricinus communis 594  
31174.m000025 B9TE65 PAC:16824856 Ricinus communis 149  
29666.m001483 B9SAI0 PAC:16805177 Ricinus communis 341  
28124.m000248 B9T3U0 PAC:16799987 Ricinus communis 386  
Cucsa.002310.1 PAC:16950907 Cucumis sativus 91  
Cucsa.104270.1 PAC:16959172 Cucumis sativus 531  
Cucsa.104270.2 PAC:16959173 Cucumis sativus 453  
Cucsa.132560.1 A0A0A0LL45 PAC:16962577 Cucumis sativus 185  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11058743
            11058763
            11058769
            11058756
            12432930
            12909634