Protein Domain : IPR006439

Type:  Family Name:  HAD hydrolase, subfamily IA
Description:  The Haloacid Dehalogenase (HAD) superfamily is defined by the presence of three short catalytic motifs []. The subfamilies are defined [] based on the location and the observed or predicted fold of a so-called capping domain [], or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily IA and IB are separated based on an apparent phylogenetic bifurcation. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA.NOTE: Three variant models were created by TIGRFAMs with some overlap among them to cover subfamily IA. This serves the purpose of eliminating the overlap with models of more distantly related HAD subfamilies caused by an overly broad single model. Short Name:  HAD-SF_hydro_IA

7 Child Features

DB identifier Type Name
IPR011949 Family HAD-superfamily hydrolase, subfamily IA, REG-2-like
IPR023943 Family Enolase-phosphatase E1
IPR011951 Family HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB
IPR023733 Family Pyrophosphatase PpaX
IPR006351 Family 3-amino-5-hydroxybenzoic acid synthesis-related
IPR006346 Family 2-phosphoglycolate phosphatase, prokaryotic
IPR011950 Family HAD-superfamily hydrolase, subfamily IA, CTE7

0 Contains

4 Cross Referencess

Identifier
PR00413
TIGR01493
TIGR01509
TIGR01549

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0016787 IPR006439
GO:0008152 IPR006439

2 Ontology Annotations

GO Term Gene Name
GO:0016787 IPR006439
GO:0008152 IPR006439

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
93135 D8RHR1 PAC:15419071 Selaginella moellendorffii 229  
93629 D8RGM5 PAC:15422748 Selaginella moellendorffii 197  
78116 D8QW59 PAC:15419200 Selaginella moellendorffii 238  
79954 D8QYE7 PAC:15405952 Selaginella moellendorffii 1052  
105011 D8RYS4 PAC:15411818 Selaginella moellendorffii 372  
418548 D8S622 PAC:15407409 Selaginella moellendorffii 228  
233432 D8S8Z1 PAC:15422528 Selaginella moellendorffii 333  
444867 D8SDK1 PAC:15419765 Selaginella moellendorffii 195  
155351 D8SHE7 PAC:15405440 Selaginella moellendorffii 271  
167838 D8R473 PAC:15422221 Selaginella moellendorffii 258  
447828 D8T2L6 PAC:15406060 Selaginella moellendorffii 379  
89062 D8RAR4 PAC:15406305 Selaginella moellendorffii 226  
437487 D8QMI5 PAC:15418342 Selaginella moellendorffii 286  
73861 D8QQV7 PAC:15410066 Selaginella moellendorffii 254  
13935 D8RDB3 PAC:15412214 Selaginella moellendorffii 260  
90084 D8RC78 PAC:15409593 Selaginella moellendorffii 214  
evm.model.supercontig_123.9 PAC:16407161 Carica papaya 210  
evm.model.supercontig_128.11 PAC:16407433 Carica papaya 261  
evm.model.supercontig_169.20 PAC:16410541 Carica papaya 299  
evm.model.supercontig_233.12 PAC:16414362 Carica papaya 241  
evm.model.supercontig_3.348 PAC:16416644 Carica papaya 527  
evm.model.supercontig_337.4 PAC:16417813 Carica papaya 329  
evm.model.supercontig_3597.2 PAC:16418278 Carica papaya 178  
evm.model.supercontig_4.47 PAC:16419342 Carica papaya 154  
evm.model.supercontig_48.172 PAC:16420809 Carica papaya 528  
evm.model.supercontig_57.45 PAC:16422867 Carica papaya 283  
evm.model.supercontig_58.124 PAC:16422968 Carica papaya 262  
evm.model.supercontig_58.125 PAC:16422969 Carica papaya 198  
evm.model.supercontig_74.45 PAC:16425736 Carica papaya 378  
evm.model.supercontig_74.91 PAC:16425787 Carica papaya 247  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7966317
            10956028
            11601995