Protein Domain : IPR006502

Type:  Family Name:  Protein of unknown function PDDEXK-like
Description:  PDDEXK_6 is a family of plant proteins that are distant homologues of the PD-(D/E)XK nuclease superfamily. The core structure is retained, as alpha-beta-beta-beta-alpha-beta. It retains the characteristic PDDEXK motifs II and III in modified forms - xDxxx motif located in the second core beta-strand, where x is any hydrophobic residue, and a D/E)X(D/N/S/C/G) pattern. The missing positively charged residue in motif III is possibly replaced by a conserved arginine in motif IV located in the proceeding alpha-helix []. The family is not in general fused with any other domains, so its function cannot be predicted [].This family of uncharacterised plant proteins are defined by a region found toward the C terminus. This region is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence. Short Name:  PDDEXK-like

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PTHR31579
PF04720
TIGR01615

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
9258 D8RKS0 PAC:15406551 Selaginella moellendorffii 67  
9264 D8QUQ8 PAC:15406572 Selaginella moellendorffii 62  
36374 D8QYD0 PAC:15408485 Selaginella moellendorffii 152  
36433 D8SIT3 PAC:15409225 Selaginella moellendorffii 142  
129774 D8T1G3 PAC:15420980 Selaginella moellendorffii 115  
71285 PAC:15421890 Selaginella moellendorffii 248  
evm.model.supercontig_1.408 PAC:16404353 Carica papaya 310  
evm.model.supercontig_152.70 PAC:16409658 Carica papaya 236  
evm.model.supercontig_1938.1 PAC:16412235 Carica papaya 304  
evm.model.supercontig_211.27 PAC:16413655 Carica papaya 283  
evm.model.supercontig_27.33 PAC:16415652 Carica papaya 300  
evm.model.supercontig_42.117 PAC:16419698 Carica papaya 301  
evm.model.supercontig_49.60 PAC:16421131 Carica papaya 246  
evm.model.supercontig_52.84 PAC:16422111 Carica papaya 134  
evm.model.supercontig_58.1 PAC:16422940 Carica papaya 289  
evm.model.supercontig_8.100 PAC:16426376 Carica papaya 290  
29842.m003511 B9RXD1 PAC:16810644 Ricinus communis 306  
29844.m003193 B9RTH3 PAC:16810901 Ricinus communis 393  
29883.m001982 B9S4R3 PAC:16812070 Ricinus communis 364  
29938.m000607 B9SPW8 PAC:16814230 Ricinus communis 215  
29983.m003180 B9RVY5 PAC:16814948 Ricinus communis 292  
30003.m000342 B9SXY6 PAC:16815451 Ricinus communis 307  
30136.m001024 B9RU16 PAC:16819152 Ricinus communis 258  
30178.m000843 B9SMN1 PAC:16822817 Ricinus communis 286  
30190.m010876 B9RBD3 PAC:16823243 Ricinus communis 308  
27985.m000868 B9SJI6 PAC:16799712 Ricinus communis 249  
29070.m000135 B9T5I3 PAC:16802237 Ricinus communis 285  
Cucsa.386700.1 A0A0A0LKR8 PAC:16982720 Cucumis sativus 412  
Cucsa.386700.3 PAC:16982722 Cucumis sativus 406  
Cucsa.044820.1 PAC:16953260 Cucumis sativus 285  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            17584917
            22936940