Gene : Aqcoe4G024600 A. coerulea v3.1

Defline:  (1 of 3) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  246
Name:  ? Aqcoe4G024600 Secondary Identifier:  ? PAC:33067158

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acoerulea GLYOXYLATE-BYPASS Aquilegia coerulea pathologic  
Acoerulea PWY-5464 Aquilegia coerulea pathologic  
Acoerulea PWY-561 Aquilegia coerulea pathologic  
Acoerulea PWY-5690 Aquilegia coerulea pathologic  
Acoerulea PWY-6549 Aquilegia coerulea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe4G024600 0.5kb upstream 0.5kb upstream 5462 true Chr_04: 2122722-2128183 Aquilegia coerulea
Aqcoe4G024600 0.5kb upstream 0.5kb upstream 500 false Chr_04: 2122722-2123221 Aquilegia coerulea
Aqcoe4G024600 0.5kb downstream 0.5kb downstream 5462 true Chr_04: 2123222-2128683 Aquilegia coerulea
Aqcoe4G024600 0.5kb downstream 0.5kb downstream 500 false Chr_04: 2128184-2128683 Aquilegia coerulea
Aqcoe4G024600 1.0kb upstream 1.0kb upstream 5962 true Chr_04: 2122222-2128183 Aquilegia coerulea
Aqcoe4G024600 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 2122222-2123221 Aquilegia coerulea
Aqcoe4G024600 1.0kb downstream 1.0kb downstream 5962 true Chr_04: 2123222-2129183 Aquilegia coerulea
Aqcoe4G024600 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 2128184-2129183 Aquilegia coerulea
Aqcoe4G024600 2.0kb upstream 2.0kb upstream 6962 true Chr_04: 2121222-2128183 Aquilegia coerulea
Aqcoe4G024600 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 2121222-2123221 Aquilegia coerulea
Aqcoe4G024600 2.0kb downstream 2.0kb downstream 6962 true Chr_04: 2123222-2130183 Aquilegia coerulea
Aqcoe4G024600 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 2128184-2130183 Aquilegia coerulea
Aqcoe4G024600 5.0kb upstream 5.0kb upstream 9962 true Chr_04: 2118222-2128183 Aquilegia coerulea
Aqcoe4G024600 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 2118222-2123221 Aquilegia coerulea
Aqcoe4G024600 5.0kb downstream 5.0kb downstream 9962 true Chr_04: 2123222-2133183 Aquilegia coerulea
Aqcoe4G024600 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 2128184-2133183 Aquilegia coerulea
Aqcoe4G024600 10.0kb upstream 10.0kb upstream 14962 true Chr_04: 2113222-2128183 Aquilegia coerulea
Aqcoe4G024600 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 2113222-2123221 Aquilegia coerulea
Aqcoe4G024600 10.0kb downstream 10.0kb downstream 14962 true Chr_04: 2123222-2138183 Aquilegia coerulea
Aqcoe4G024600 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 2128184-2138183 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain