Protein Domain : IPR007144

Type:  Family Name:  Small-subunit processome, Utp11
Description:  A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]. This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar.They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis.There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. This entry contains Utp11, a large ribonuclear protein that associates with snoRNA U3 []. Short Name:  SSU_processome_Utp11

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PTHR12838
PF03998
PIRSF015952

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006364 IPR007144
GO:0032040 IPR007144

2 Ontology Annotations

GO Term Gene Name
GO:0006364 IPR007144
GO:0032040 IPR007144

0 Parent Features

581 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
73763 D8QMU9 PAC:15409288 Selaginella moellendorffii 229  
evm.model.supercontig_115.24 PAC:16406187 Carica papaya 294  
29841.m002881 B9RV90 PAC:16810594 Ricinus communis 231  
Cucsa.079870.1 A0A0A0K4N4 PAC:16956276 Cucumis sativus 226  
Cucsa.178610.1 A0A0A0LKH7 PAC:16967118 Cucumis sativus 228  
orange1.1g027033m A0A067F1G9 PAC:18123212 Citrus sinensis 229  
orange1.1g027818m A0A067EQG7 PAC:18123213 Citrus sinensis 218  
orange1.1g031592m A0A067EQ91 PAC:18123214 Citrus sinensis 157  
orange1.1g030475m A0A067E726 PAC:18105000 Citrus sinensis 177  
orange1.1g030436m A0A067E726 PAC:18105001 Citrus sinensis 177  
orange1.1g031143m A0A067EI35 PAC:18105002 Citrus sinensis 165  
orange1.1g032940m A0A067EIY2 PAC:18105004 Citrus sinensis 130  
orange1.1g032675m A0A067EAF9 PAC:18105003 Citrus sinensis 136  
AT3G60360.1 Q9M223 PAC:19660486 Arabidopsis thaliana 228  
Thhalv10006222m V4LNL8 PAC:20190460 Eutrema salsugineum 228  
Ciclev10012956m V4T2F4 PAC:20797112 Citrus clementina 163  
Ciclev10013075m V4S867 PAC:20797113 Citrus clementina 138  
Ciclev10012814m V4SXB4 PAC:20797111 Citrus clementina 200  
Ciclev10012657m V4UVG1 PAC:20797110 Citrus clementina 229  
Ciclev10010418m V4UJG0 PAC:20795686 Citrus clementina 229  
Lus10034210 PAC:23176063 Linum usitatissimum 231  
Lus10029059 PAC:23151779 Linum usitatissimum 231  
Potri.016G024300.2 B9IHG8 PAC:27012703 Populus trichocarpa 229  
Potri.016G024300.3 PAC:27012704 Populus trichocarpa 199  
Potri.016G024300.1 B9IHG8 PAC:27012702 Populus trichocarpa 229  
Potri.006G026000.1 PAC:27007140 Populus trichocarpa 184  
Gorai.011G260100.1 A0A0D2RT41 PAC:26808683 Gossypium raimondii 229  
8244 I0Z3Q1 PAC:27389856 Coccomyxa subellipsoidea C-169 177  
17462 C1MSJ3 PAC:27341980 Micromonas pusilla CCMP1545 242  
82666 C1E9E2 PAC:27402273 Micromonas sp RCC299 240  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12068309
            15590835
            15489292