Protein Domain : IPR015362

Type:  Family Name:  WIBG family
Description:  Partner of Y14 and mago (PYM, also known as WIBG) is a key regulator of the exon junction complex (EJC), a multiprotein complex that associates immediately upstream of the exon-exon junction on mRNAs and serves as a positional landmarks for the intron exon structure of genes and directs post-transcriptional processes in the cytoplasm such as mRNA export, nonsense-mediated mRNA decay (NMD) or translation [, ].Members of this family adopt a structure consisting of a small globular all-beta-domain, with a three-stranded beta-sheet and a contiguous beta-hairpin. They bind to Mago alpha-helices via extensive electrostatic interactions and at a beta2-beta3 loop via hydrophobic interactions []. Short Name:  WIBG_fam

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF09282
SSF101931

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

515 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
74160 D8QN86 PAC:15407488 Selaginella moellendorffii 50  
evm.model.supercontig_2.26 PAC:16412630 Carica papaya 232  
30116.m000387 B9SRJ9 PAC:16818053 Ricinus communis 252  
Cucsa.218430.1 A0A0A0K274 PAC:16969673 Cucumis sativus 230  
Cucsa.218430.2 A0A0A0K274 PAC:16969674 Cucumis sativus 230  
Cucsa.305370.1 PAC:16976051 Cucumis sativus 234  
Cucsa.305370.2 PAC:16976052 Cucumis sativus 234  
orange1.1g026726m PAC:18128968 Citrus sinensis 234  
orange1.1g026639m PAC:18128967 Citrus sinensis 235  
orange1.1g024888m PAC:18116163 Citrus sinensis 261  
orange1.1g021322m PAC:18116162 Citrus sinensis 314  
orange1.1g024945m PAC:18116164 Citrus sinensis 260  
AT1G11400.1 Q9LPZ4 PAC:19652471 Arabidopsis thaliana 204  
AT1G11400.3 Q9LPZ4 PAC:19652473 Arabidopsis thaliana 204  
AT1G11400.2 Q9LPZ4 PAC:19652472 Arabidopsis thaliana 204  
Thhalv10008698m V4L085 PAC:20185877 Eutrema salsugineum 226  
Ciclev10002345m V4T1G8 PAC:20786125 Citrus clementina 235  
Ciclev10002347m V4V0E4 PAC:20786126 Citrus clementina 234  
Lus10007180 PAC:23162080 Linum usitatissimum 220  
Potri.001G209100.1 A0A2K2C150 PAC:27043314 Populus trichocarpa 241  
Potri.001G209100.9 PAC:27043320 Populus trichocarpa 210  
Potri.001G209100.2 A9PH40 PAC:27043315 Populus trichocarpa 240  
Potri.001G209100.8 PAC:27043317 Populus trichocarpa 210  
Potri.001G209100.3 PAC:27043316 Populus trichocarpa 231  
Potri.001G209100.4 PAC:27043318 Populus trichocarpa 210  
Potri.001G209100.5 PAC:27043319 Populus trichocarpa 210  
Potri.003G021500.2 A0A2K2B0A7 PAC:27000097 Populus trichocarpa 213  
Potri.003G021500.1 A0A2K2B0A6 PAC:27000096 Populus trichocarpa 214  
Gorai.002G208500.1 A0A0D2Q9V8 PAC:26792148 Gossypium raimondii 231  
Gorai.005G260300.1 A0A0D2RLJ6 PAC:26801473 Gossypium raimondii 225  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14968132
            19410547
            18026120